Gene Psyr_3282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3282 
Symbol 
ID3368809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3929512 
End bp3930228 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content61% 
IMG OID637653633 
Productregulatory protein, TetR 
Protein accessionYP_236352 
Protein GI66046511 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGT CGGAAACCGT TGAACGCATT CTTGATGCTG CAGAGCAGTT GTTCGCAGAG 
AAAGGCTTTG CCGAAACGTC CTTGCGTCTT ATCACCAGCA AGGCGTCGGT CAATCTGGCT
GCGGTGAATT ATCACTTCGG CTCGAAGAAG GCGTTGATTC AGGCCGTGTT CTCGCGTTTT
CTGGGACCGT TCTGCATCAG TCTCGATCGC GAACTGGAAC GCCGCCAGGC GAAACCCGAA
CACAAGCCAA GCCTTGAGGA ACTGCTGGAG ATTCTCGTCG AGCAGGCGCT TGTGGTGCAG
CCGCGCAGCG GTAACGACCT GTCGATCTTC ATGCGCCTGC TGGGGCTTGC CTTCAGTCAG
AGCCAGGGCC ACCTGCGGCG CTACCTCGAA GACATGTATG GCAAGGTGTT CCGTCGCTAC
ATGACGCTGG TCAACGAAGC CGCGCCGCGC ATTCCGCCCA TCGAGCTGTT CTGGCGCGTG
CACTTCATGC TCGGCGCTGC GGCGTTCAGC ATGTCCGGGA TCAAGGCCCT GCGCGCCATT
GCCGAGACCG ATTTCGGCGT CAATACCTCC ATCGAGCAGG TCATGCGCCT GATGGTGCCT
TTTCTGGCCG CCGGCATGCG CGCCGACACC GGCGTCAGCG ATCCTGCGAT GATCGCCGCC
CAGCTCAGGC CGCGGACCAA GAGCAGCACC AGCACACCTG CGGTCGCCAA GGCCTGA
 
Protein sequence
MAQSETVERI LDAAEQLFAE KGFAETSLRL ITSKASVNLA AVNYHFGSKK ALIQAVFSRF 
LGPFCISLDR ELERRQAKPE HKPSLEELLE ILVEQALVVQ PRSGNDLSIF MRLLGLAFSQ
SQGHLRRYLE DMYGKVFRRY MTLVNEAAPR IPPIELFWRV HFMLGAAAFS MSGIKALRAI
AETDFGVNTS IEQVMRLMVP FLAAGMRADT GVSDPAMIAA QLRPRTKSST STPAVAKA