Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2770 |
Symbol | |
ID | 3368288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3354775 |
End bp | 3355878 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637653119 |
Product | tail fiber domain-containing protein |
Protein accession | YP_235847 |
Protein GI | 66046006 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00369502 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0266249 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTGGT ACAAGTCGGG TACGGTTTCC GTCACCCAAA ATTCGAATGC GGTCATTGGC ACCAATACCG CCTTCATCGC GAACAGCCGG GTAGGTGATG GCTTTCGCGG GCCTGATGGT GGCTGGTATG AGGTGACCAA CATCGCCAGC AATACCGCGA TGTCGATCGC GCCGAACTAT CAGGGAGTCA CCAACAACGC GGGCGGGTAC GCGCTTGCTC CGATGCAGGG CTACGTCAAG GATTCTGCTG ATGCGCTCCG GGCGCTGGTC AATCAGTTCG GCTCTACCCT TGCGGTGTTG GGCACTTCTG GTACGCGCGA AGGTGTGCGC GCAGCACTTG CTGCTGCCGC CGCCGGGAAC AACAGCGACA TCCTCTCCCT GTCGGGTCTG ACAACGGCGC TGACGATTGA GCAGGGTGGG ACCGGCAAGA AGAGTGCTGG CGAAGCCATC CAGGCATTGG GCGGTGTGCG CTTGGGGGCG GCTAATTCTT CCGTTGGGAC AAGTCTTTTT TCGGGAGCTC CGCCCGGCAT AGCCTCAATA GGCCCCACTA ACAATAACGG TAACACGGCG CTACGAATAG GTAATGGCAA CAACAATAGC GCATCCGCGG TAATGACATT TATTCGAGAT GGGGCGTTTG GTCTTCACCT TGGAGTTGAC ACCGACAACA AATTCAAGAT CGGTGGGTTT TCAATGGGTG AAGTAGCACG GACCTTATAC CACGAGGGTA ACGCAGTAGG GACCGTTTCA CAGTCGGGAG GCATGCCCAC CGGGGCGATA ATAGAAACTG GAAATTTGAA TGGGGGCACG TTCACGAAGT ATTTGGACGG CACGATGATT TGCCGAGGGA TATCGCCAGC CCCAGTGGCG GCTAGCCAGG GCGGTGGACC GATCTTCTAC TCAGGCGGCG TTTCTTTCGT ATTTCCTGCG CCATTTGCTG CTGTTCCGGC AGTGACGATG CAGGCCATGA CTTCTAATGG TTACTTTTGT TGGGGGGCAT CCGATGGTAG TGCCACTACT ACGGGCATCA TCGGTCGAGT TGTTTCCCCG TCGAGTACCG CTTCTTCGTA CCTTTGTTAT ATAGCCGTTG GCAGGTGGTT CTAA
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Protein sequence | MPWYKSGTVS VTQNSNAVIG TNTAFIANSR VGDGFRGPDG GWYEVTNIAS NTAMSIAPNY QGVTNNAGGY ALAPMQGYVK DSADALRALV NQFGSTLAVL GTSGTREGVR AALAAAAAGN NSDILSLSGL TTALTIEQGG TGKKSAGEAI QALGGVRLGA ANSSVGTSLF SGAPPGIASI GPTNNNGNTA LRIGNGNNNS ASAVMTFIRD GAFGLHLGVD TDNKFKIGGF SMGEVARTLY HEGNAVGTVS QSGGMPTGAI IETGNLNGGT FTKYLDGTMI CRGISPAPVA ASQGGGPIFY SGGVSFVFPA PFAAVPAVTM QAMTSNGYFC WGASDGSATT TGIIGRVVSP SSTASSYLCY IAVGRWF
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