Gene Psyr_2659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2659 
Symbol 
ID3368176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3230030 
End bp3231307 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content52% 
IMG OID637653007 
Producthypothetical protein 
Protein accessionYP_235736 
Protein GI66045895 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00418802 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCAA CAGTGCTCAG TACTTTCGCC AAAGGTGATC TCTTCGAGGA GCAGGTTTTC 
CAATTCCTGA GTCGCGAGAT CGATGAAGGG CGGTTTTTTT GCCGGCCTGA GCATTGCCAG
ATATTCAGGA AGAGACGCTA TTACTCCCGT GATCGAGAAG ACGATATCGT TTTTGACATT
GCCATAGAGA TCTTCCTTCC TGACCAACCT AAGCCGTCAA TAATTGTCCT TGTCGAATGT
AAGAATTATG CGGGCACCGT TCCGGTTGGA GATATCGAGG AGTTTGGGGC CAAGATCCGC
CAAGTCACAG GATTCAATGC AAAAGGGATA TTCGTATCGT CAAGCGCCTT CCAGTCCGGC
ACGATCAATA TCGCCAGGAA TCAGGGTTTC GGTGTTATTC GGTATTTTCC GGACGAAGGC
TTCCAATGGG AGCTGGCTCG CGCCCTCCTC ACGGGCGTGA GAAATGCATC ATCGCGAAAG
CGTGCTGAAA TTGAGTACGC TCTGACCCAG CCTGGCTTTC GGCCGACTCT CACGGGAGCT
TATGCTGTCA CCCCAGGGGG CTACACCAAT GCTTGGGAGG GGATCTGGAC AGGGCTCGAT
CTGGCTGGCA GTTTCGATCC AGCTATATTG GAAATCATTC GGCCTCCTCA CCTGCCAGTC
CTTAGAATTG GCTATCTCTC TAAGGGAGCA ATTGAAAATC TGTCAGAGCA GGTTTTGGGA
TCTGCCGGTT ATACAAGGGG GGTAGTAGAT CTGGAAGCCG TAGTCGCTGG TGCGACCACG
TCGAGTGTCT TGACCGTTAG CTACGTAGAT GAACCAGATG GTGCTTTAGG TAGGATCAGC
TTTGCCCCCT TAGAGATAAA AATCAATTCT CGCGACAAAA CAGCCCCGAT GACCCGGTTC
ACGCTTGCTC ACGAGCTGGG GCACTATTAT CTCAATCACG GCCGCTACAT TGCACGGGAG
AGCCTACGTT CGAAGGACAT TGATCAGTTT GAGCGCATCG CTGTCCCCAA AAGCGAATTG
GAACGCCTCG AATGGCAAGC GAATACATTT GCGTCTTACC TACTGATGCC TGAACGGCAT
TTTCTCGAAG CTTTCTCGCT TCTGGTTGAG CACCACGATA TTCGCAACCG AGGACATGGC
GCCCTTTTTC TCGATGACCA GCGTGACAAC ATCAGAAATT ATCACTTGGT GCTGGACGCG
CTGAGCCGAT ATTTTGCTGT TTCTAAAAGC GCAGCGGCCA TCCGTTTGCG AGGCCTTGGA
GTCTTAGTCG AAGCCTGA
 
Protein sequence
MEPTVLSTFA KGDLFEEQVF QFLSREIDEG RFFCRPEHCQ IFRKRRYYSR DREDDIVFDI 
AIEIFLPDQP KPSIIVLVEC KNYAGTVPVG DIEEFGAKIR QVTGFNAKGI FVSSSAFQSG
TINIARNQGF GVIRYFPDEG FQWELARALL TGVRNASSRK RAEIEYALTQ PGFRPTLTGA
YAVTPGGYTN AWEGIWTGLD LAGSFDPAIL EIIRPPHLPV LRIGYLSKGA IENLSEQVLG
SAGYTRGVVD LEAVVAGATT SSVLTVSYVD EPDGALGRIS FAPLEIKINS RDKTAPMTRF
TLAHELGHYY LNHGRYIARE SLRSKDIDQF ERIAVPKSEL ERLEWQANTF ASYLLMPERH
FLEAFSLLVE HHDIRNRGHG ALFLDDQRDN IRNYHLVLDA LSRYFAVSKS AAAIRLRGLG
VLVEA