Gene Psyr_2585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2585 
Symbol 
ID3368102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3029650 
End bp3030858 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content61% 
IMG OID637652933 
ProductOrn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 
Protein accessionYP_235662 
Protein GI66045821 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.126508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000677908 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCATAAGG TGCCGGAGAC CGTACTGGCG GCCATCAAGG AGGCTCGGGC GCTGGAAACC 
GACCCGCTGG CGGCCTTCTT CTACGATCTG GACGCGTTGC AGCAGCATGT CAGTGAAGTC
ATGGCGGCGC TGCCCGCAGG TGTCGAGCTG TATTACGCGA TCAAGGCCAA CAGCGAAGCG
CTGATGCTGG AAACCCTGGC CCCTCTGGTC AGTGGCTTTG AAATTTCCTC TGGGGGCGAG
ATCGAGCGGG TGATGGCCTG TCCGACACGC AAGCCCTACG TGTTCTCGGG CCCAGGCAAA
CTCGATTCCG ATCTGCGCTC GGCGTTGCTC AACAAGGTTG AAGCCATTCA CCTGGAGAGC
CTCAACGAAA TCGCGCGTCT GCAACAGCTG GCAGAACAGG CGGGGCGCGT GCAGCCGGTG
TTCCTGCGCA TCAATCCGCA ACTGCCCGCT GCACAGTCGA GCCGGCTGGC GATGGCCGGG
ACCGCGACAC CGTTCGGCAT TGACGAAGCC GACCTGGCCG AGGCGGTCAG ACGCGTGGAC
AACGCCAGCC ACCTGACGCT CAAGGGCTTT CACGTACATG CCATGTCGCA TCAGATGTCG
GTTGAACGTC ATGAGCAGTT GCTCGATTTC TACCTGCAGC GCTGGCAGGA ATGGAAGGCT
TTGGCCCGCG ACCCGAGCCA GCTCACCCAT TTCAACGTCG GCGGCGGTAT TGGCGTCGAT
TACCTCAACA GCCAGCAGTT CGACTGGCAG CGGCTGTGCC GTTATCTGGA AAAACGCCTG
GGCGAGCAGC ACGACGCGCC GATCCTGCGC TTTGAGCCGG GACGCTTCAT CAGCGCCTAT
TGCGGCTATT ACGCCATCGA GGTGCTGGAC AGCAAAACCA GCCACGGCGA GCATTTTCTG
GTCTGCCGAG GCGGAACTCA CCAGTTTCGC CTGCCGGTTG CGCAAAGCCA TGACCATCCG
GTTATCCATC TGCCGAGTAC GCCGCAGCCA GCTGCCTCGT CAGAACAGGC TTATACCATT
GTCGGCCAGC TATGCACGCC CAAGGACGTG CTGAGCCGTC GCCAGCCACT CAAGGGTGTG
AACATTGGTG ACCTGCTGGT TCTGCCGCTG GCGGGAGCGT ATGGCTACAA CATTTCCCAT
GCCGACTTTC TCTGTCATCC ACGACCGTCA CAGCACTTCG TGCGCAACGG CGAACGGGTT
CGCCAATGA
 
Protein sequence
MHKVPETVLA AIKEARALET DPLAAFFYDL DALQQHVSEV MAALPAGVEL YYAIKANSEA 
LMLETLAPLV SGFEISSGGE IERVMACPTR KPYVFSGPGK LDSDLRSALL NKVEAIHLES
LNEIARLQQL AEQAGRVQPV FLRINPQLPA AQSSRLAMAG TATPFGIDEA DLAEAVRRVD
NASHLTLKGF HVHAMSHQMS VERHEQLLDF YLQRWQEWKA LARDPSQLTH FNVGGGIGVD
YLNSQQFDWQ RLCRYLEKRL GEQHDAPILR FEPGRFISAY CGYYAIEVLD SKTSHGEHFL
VCRGGTHQFR LPVAQSHDHP VIHLPSTPQP AASSEQAYTI VGQLCTPKDV LSRRQPLKGV
NIGDLLVLPL AGAYGYNISH ADFLCHPRPS QHFVRNGERV RQ