Gene Psyr_2552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2552 
Symbol 
ID3368069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2966004 
End bp2966471 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content60% 
IMG OID637652900 
Productcyclase/dehydrase 
Protein accessionYP_235629 
Protein GI66045788 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00196411 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATG TATCAACCAG TGTTCTTCTC GGTGACTTCG AGCCTGGCGA GGTCTGGCCG 
ATTCTCTCGG ACTTCGCTCG CTATCCCGAC TTCATGAGCG ATGTGCTGGA GGTGATCGTT
CACCCCCGGC AGAGTGAATA CGTTTCCAGT ACGTGGCGCG TATTGATCAA TGGCAGCGAG
CTGACCTGGA CCGAGCAGGA CTGGCTGGTG ACGGACGAGC GCATCGAGTT CAAGCAGACC
GATGGCGACC TTGAAGTCTG GTACGGCGAG TGGCTGCTGA TCCAGCGCGA AGACGGCTTG
CACGTGGACC TGAACGTCAC CTTCGACCTG GGCATCCCGT CGCTGGCCGA AGTCCTGCAC
CCGATCGGTG AGCGGGCGAT TCGCGCCAAC AACATCCAGA TGCTGGACGG GATACGCAAT
CAACTGCTCG CTCGCCGTCA TCAGCGGGTT GCGGCAGGGG GCTGCTGA
 
Protein sequence
MPDVSTSVLL GDFEPGEVWP ILSDFARYPD FMSDVLEVIV HPRQSEYVSS TWRVLINGSE 
LTWTEQDWLV TDERIEFKQT DGDLEVWYGE WLLIQREDGL HVDLNVTFDL GIPSLAEVLH
PIGERAIRAN NIQMLDGIRN QLLARRHQRV AAGGC