Gene Psyr_2443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2443 
Symbol 
ID3367960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2828303 
End bp2829526 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content61% 
IMG OID637652791 
Producthypothetical protein 
Protein accessionYP_235520 
Protein GI66045679 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000302372 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATGCAAC TGATTCGATG CTTTCTGGAG CAGGGCTGGC AGATCACCTT CGCCAGCCCT 
GCCACCGAGG GCGAGCATCG CGCCGATCTG CTCAGTCTGG GCATCAATGA AGTGCACATC
ACGCTCAACG ACAGCAGTTT TGATGTATTT GTCAGCCAAT TGCAGCCTGA TGTGGTGCTC
TTCGATCAGT TCATGATCGA GGAGCAGTTC GGCTGGCGGG TCGAGCAGCA GTGTCCTGAC
GCACTGCGGA TGCTGGAGAC GTCGGATTTC CAGAGCCTGC GCCACGCACG TCATCAGTTG
CTGAAGGACT CGCTGAACAG CGATTGTGCC GAGGCCGGGC CGGGCAGCGC CGACGTTTCA
GCGCCGCAGC TTTTCCGGCA GATCGCATCC AGTGATCTGG CGCAGCGCGA AATTGCTTCG
TTGTATCGCT GCGACCTCAA CCTGATGACG TCGGATGTCG AAATCGCGCT GTTGAGCGGC
CCTTTCGGCC TGCCCGCGGC GCTGCTGCAC TGGTGCCCAT TGATGATCGA CGGTATTCCC
GACAGCTTCC GGCCTTTTGC ACAGCGTGCG CACTTCCTCA GCATCGGCAA CTTCCGCCAT
GCGCCCAACT GGGATGCCGT GCTGTGGATG AAAACCGTTA TCTGGCCGCT GATTCGCCAG
CAACTGCCCG AAGCCCAGCT ACACATTTAT GGCGCCTATA CGCCACCCAA GGCCTCGGCG
CTGCACAATG CCGCTCAGGG CTTTCATGTG AAGCACTGGG CCGAGGATGC GCTGGAGGTC
ATGTCCAACG CGCGGGTGTG CCTCGCGCCA TTGCGCTTCG GGGCCGGCAT CAAGGGCAAG
CTGATGGACG CGATGCTCTG CGGAACGCCG TCAGTCACGA CGCCGGTGGG TGCGGAAGCC
ATGAGCGGCG GGCTGCCGTG GCCCGGCATC ATTGCCGATA ACCCTGCGGA AATCGCTGGC
GCTGCGGTCA GGCTGTATCA GGACCAGAAC CTCTGGCTTG AAGCGCAACA AGCGGGTCAG
GCGTTGCTGC AGGCACGCTT CCAGCATCGG CAGCACTGTG CGAGCCTGAT CGAACGCATC
GAGACCCTTC GCAACGGACT GACGGAGCAT CGCCTGGCGA ACTTCACCGG CGCCATGCTG
CGGCACCATC ACCACAAGAG CACCAAATAC ATGGCGCAGT GGATCGAAGC GAAGAATCGC
AACAAGGATG AAAAACCGGC TTAG
 
Protein sequence
MMQLIRCFLE QGWQITFASP ATEGEHRADL LSLGINEVHI TLNDSSFDVF VSQLQPDVVL 
FDQFMIEEQF GWRVEQQCPD ALRMLETSDF QSLRHARHQL LKDSLNSDCA EAGPGSADVS
APQLFRQIAS SDLAQREIAS LYRCDLNLMT SDVEIALLSG PFGLPAALLH WCPLMIDGIP
DSFRPFAQRA HFLSIGNFRH APNWDAVLWM KTVIWPLIRQ QLPEAQLHIY GAYTPPKASA
LHNAAQGFHV KHWAEDALEV MSNARVCLAP LRFGAGIKGK LMDAMLCGTP SVTTPVGAEA
MSGGLPWPGI IADNPAEIAG AAVRLYQDQN LWLEAQQAGQ ALLQARFQHR QHCASLIERI
ETLRNGLTEH RLANFTGAML RHHHHKSTKY MAQWIEAKNR NKDEKPA