Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2443 |
Symbol | |
ID | 3367960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2828303 |
End bp | 2829526 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652791 |
Product | hypothetical protein |
Protein accession | YP_235520 |
Protein GI | 66045679 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000302372 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATGCAAC TGATTCGATG CTTTCTGGAG CAGGGCTGGC AGATCACCTT CGCCAGCCCT GCCACCGAGG GCGAGCATCG CGCCGATCTG CTCAGTCTGG GCATCAATGA AGTGCACATC ACGCTCAACG ACAGCAGTTT TGATGTATTT GTCAGCCAAT TGCAGCCTGA TGTGGTGCTC TTCGATCAGT TCATGATCGA GGAGCAGTTC GGCTGGCGGG TCGAGCAGCA GTGTCCTGAC GCACTGCGGA TGCTGGAGAC GTCGGATTTC CAGAGCCTGC GCCACGCACG TCATCAGTTG CTGAAGGACT CGCTGAACAG CGATTGTGCC GAGGCCGGGC CGGGCAGCGC CGACGTTTCA GCGCCGCAGC TTTTCCGGCA GATCGCATCC AGTGATCTGG CGCAGCGCGA AATTGCTTCG TTGTATCGCT GCGACCTCAA CCTGATGACG TCGGATGTCG AAATCGCGCT GTTGAGCGGC CCTTTCGGCC TGCCCGCGGC GCTGCTGCAC TGGTGCCCAT TGATGATCGA CGGTATTCCC GACAGCTTCC GGCCTTTTGC ACAGCGTGCG CACTTCCTCA GCATCGGCAA CTTCCGCCAT GCGCCCAACT GGGATGCCGT GCTGTGGATG AAAACCGTTA TCTGGCCGCT GATTCGCCAG CAACTGCCCG AAGCCCAGCT ACACATTTAT GGCGCCTATA CGCCACCCAA GGCCTCGGCG CTGCACAATG CCGCTCAGGG CTTTCATGTG AAGCACTGGG CCGAGGATGC GCTGGAGGTC ATGTCCAACG CGCGGGTGTG CCTCGCGCCA TTGCGCTTCG GGGCCGGCAT CAAGGGCAAG CTGATGGACG CGATGCTCTG CGGAACGCCG TCAGTCACGA CGCCGGTGGG TGCGGAAGCC ATGAGCGGCG GGCTGCCGTG GCCCGGCATC ATTGCCGATA ACCCTGCGGA AATCGCTGGC GCTGCGGTCA GGCTGTATCA GGACCAGAAC CTCTGGCTTG AAGCGCAACA AGCGGGTCAG GCGTTGCTGC AGGCACGCTT CCAGCATCGG CAGCACTGTG CGAGCCTGAT CGAACGCATC GAGACCCTTC GCAACGGACT GACGGAGCAT CGCCTGGCGA ACTTCACCGG CGCCATGCTG CGGCACCATC ACCACAAGAG CACCAAATAC ATGGCGCAGT GGATCGAAGC GAAGAATCGC AACAAGGATG AAAAACCGGC TTAG
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Protein sequence | MMQLIRCFLE QGWQITFASP ATEGEHRADL LSLGINEVHI TLNDSSFDVF VSQLQPDVVL FDQFMIEEQF GWRVEQQCPD ALRMLETSDF QSLRHARHQL LKDSLNSDCA EAGPGSADVS APQLFRQIAS SDLAQREIAS LYRCDLNLMT SDVEIALLSG PFGLPAALLH WCPLMIDGIP DSFRPFAQRA HFLSIGNFRH APNWDAVLWM KTVIWPLIRQ QLPEAQLHIY GAYTPPKASA LHNAAQGFHV KHWAEDALEV MSNARVCLAP LRFGAGIKGK LMDAMLCGTP SVTTPVGAEA MSGGLPWPGI IADNPAEIAG AAVRLYQDQN LWLEAQQAGQ ALLQARFQHR QHCASLIERI ETLRNGLTEH RLANFTGAML RHHHHKSTKY MAQWIEAKNR NKDEKPA
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