| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2399 |
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| Symbol | |
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| ID | 3367914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2781346 |
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| End bp | 2782161 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637652745 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_235476 |
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| Protein GI | 66045635 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00651767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.388943 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCTGA CACCCAATGC CATGAGCCCC GGCTTGCGTA CGGGCCTGTA CCTGACCACC
GCCCTGATCG CGCTGTTCCT GTTGCTGCCG ATCCTGTTCA TCGTCCTGCT GTCGTTCGGT
TCCTCGCAGT GGCTGGTGTT CCCGCCGCCC GGCTGGACGC TGAAGTGGTA TCAGCAGTTT
TTTTCCAACC CGGACTGGAT GGCCGCGGCC ATGTCCAGCT TCAAGGTCGC GATCCTGACC
ACCCTCGCCT CGGTGGCGCT GGGCCTGCCC ACCGCGTTCG CACTGGTGCG TGGCCGGTTT
CCGGGGCGTG ATTTTCTGTA CGGCGTCTTC ACACTGCCGA TGATCGTGCC GCTGGTGATC
ATCGCCGTCG CGGTCTACGC GCTGTTTCTC AAGCTCGGTT ACACCGGCAC ATTGTTTTCC
TTCGTCGTCA GCCATGTGAT CGTCGCGTTG CCGTTCACCA TCATCTCGAT CATCAATTCG
CTGAAGCTGT TCGACCAGTC CATCGAGGAT GCTGCGGTCA TCTGCGGCGC TTCACGCTTG
CAGGCCATCT ACAAGGTGAC CTTTCCCGGG ATCCGGCCGG GCATGATGGC CGGCGCGCTG
TTCGCGTTCC TGGTGTCGTG GGACGAGGTG GTGCTGAGCG TGATGATGGC CAGCCCGACC
CTGCAAACCC TTCCCGTGAA AATGTGGACC ACCCTGCGTC AGGACCTGAC GCCGGTCATC
GCCGTCGCCT CAACGCTGCT GATCGCCCTG TCGGTGCTGA TCATGTTCAT CGCCGCGACC
CTGCGTCGCC GCAACGAAGC CAGGAGTACG TCATGA
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| Protein sequence | MLLTPNAMSP GLRTGLYLTT ALIALFLLLP ILFIVLLSFG SSQWLVFPPP GWTLKWYQQF
FSNPDWMAAA MSSFKVAILT TLASVALGLP TAFALVRGRF PGRDFLYGVF TLPMIVPLVI
IAVAVYALFL KLGYTGTLFS FVVSHVIVAL PFTIISIINS LKLFDQSIED AAVICGASRL
QAIYKVTFPG IRPGMMAGAL FAFLVSWDEV VLSVMMASPT LQTLPVKMWT TLRQDLTPVI
AVASTLLIAL SVLIMFIAAT LRRRNEARST S
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