| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2287 |
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| Symbol | |
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| ID | 3367802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2657321 |
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| End bp | 2658154 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637652637 |
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| Product | TonB, C-terminal |
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| Protein accession | YP_235368 |
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| Protein GI | 66045527 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00257812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000380211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGGCAATG TCCAGACCGC AGCCAGTGCA CATGACGTGC CCTGGCGCCA GACGCCGAGT
GGCGACCTGG TCGATCTGGG GCGTCCTTTC CGTGCGCCGC TGGCGTTAGC GCGGCTGCAA
AGCACCCCCA AGCCGATTCT GGGGCGGCGC GAAGCCATTT TGCTCGGTGC GCTGGCGCTG
GTGTTCCATG GCGCGATCAT TTACTGGCTG AGCCAGAACC CGACGCCGGC ACTGCCGGTG
GTGCCACCTG AAATTCCGCC GATGACCATC GAGTTTTCCC AGCCTGCGCC ACCGGTTGTG
GAAACACCGC CGCCAACGCC CGAGCCTGTC GTGCAGCCGG TGGTCGAGCC GCCGCCTCCG
GTCGAGGACG AACTGGCAGT CAAACCACCA CCGCCCAAAC CGATTCCCAA GCCCAAGCCA
CAGCCGCCCA AACCGGTGTT CAAGCCAGCT GTAAAACCAG TGGCCAAACC GGTTGAGCAG
CCACCCGCAC CTCCTGTACC TGCAGCCCCT GTCGCCGCGC CTGCGCCACC GGCAGCGCCC
GCACCAAAGC CGGTGACCCC GGCCTCGGCC AGCGCGGGTT ACCTGCGCAA CCCGGCCCCG
GAATACCCAT CGCTGGCCAT GCGTCGTGGC TGGGAAGGCA CTGTGCTGTT GCGCGTACAT
GTATTGGCCA GCGGCAAACC CGGCGAGATT CAGATACAGA AGAGCAGTGG CCGCGACCAG
CTCGACGACG CCGCGCTGGC GGCGGTGAAA CGCTGGAGTT TCGTTCCGGC CAAGCAGGGC
GATGTCGCCC AGGATGGCTG GGTCAGCGTG CCCATTGATT TCAAGATCAA ATGA
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| Protein sequence | MGNVQTAASA HDVPWRQTPS GDLVDLGRPF RAPLALARLQ STPKPILGRR EAILLGALAL
VFHGAIIYWL SQNPTPALPV VPPEIPPMTI EFSQPAPPVV ETPPPTPEPV VQPVVEPPPP
VEDELAVKPP PPKPIPKPKP QPPKPVFKPA VKPVAKPVEQ PPAPPVPAAP VAAPAPPAAP
APKPVTPASA SAGYLRNPAP EYPSLAMRRG WEGTVLLRVH VLASGKPGEI QIQKSSGRDQ
LDDAALAAVK RWSFVPAKQG DVAQDGWVSV PIDFKIK
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