Gene Psyr_2254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2254 
Symbol 
ID3367769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2619171 
End bp2620058 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content61% 
IMG OID637652604 
Productphosphonate metabolism PhnJ 
Protein accessionYP_235335 
Protein GI66045494 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3627] Uncharacterized enzyme of phosphonate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00439967 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.789995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCATG CACCGATGAA CACCGCACAG CAAAGGCCTG CACGGGACGA GGCCTACAAC 
TTCGCTTATC TGGACGAGCA GACCAAACGC ATGATTCGCC GCGCCTTGCT CAAGGCGGTG
GCGATCCCCG GTTATCAGGT GCCGTTCGGC GGCCGCGAAA TGCCGCTGCC GTATGGCTGG
GGCACCGGCG GGATGCAACT GACCGCGGCG ATCCTGGGCG CCGATGATGT GCTCAAGGTC
ATCGACCAGG GCGCTGACGA CACCACCAAC GCGGTCTCGA TCAGGCGTTT CTTTGCCCGC
ACGGCCGGCA TCGCCACCAC CGAGCGCACG CCTGAGGCGA CGGTCATCCA GACCCGTCAC
CGGATCCCGG AAACACCGCT GCACGCCGAT CAGATCATGG TCTATCAGGT GCCGATTCCC
GAACCGCTGC GTTTCATCGA GCCCTCGGAA ACCGAGACCC GGACCATGCA CGCGCTGGAT
GATTACGGCG TCATGCACGT CAAACTCTAC GAGGACATCG CCACTTTCGG CCATATCGCC
ACCAGTTACG CTTATCCAGT GATGGTCGAT GAACGCTATG TGATGGACCC GTCGCCGATT
CCCAAATTCG ATAACCCCAA GCTGCACATG AGCCCGGCAC TGATGCTGTT CGGCGCGGGG
CGCGAAAAGC GTCTGTACGC CGTGCCGCCG TATACGCAGG TGGTGAGCCT GGACTTTGAA
GATCACCCGT TCGAGGTGCA GCGCTGGGAG CAGTGCTGTG CGATCTGTGG CAGCCATGAT
TCCTTTCTCG ACGAGCTGAT TCTCGACGAT GCCGGGACGC AGAGCTTTGT CTGTTCCGAC
ACCGATTACT GCGCCCAGCG CGTCAAACAG CAGGAGAACG ACCGATGA
 
Protein sequence
MTHAPMNTAQ QRPARDEAYN FAYLDEQTKR MIRRALLKAV AIPGYQVPFG GREMPLPYGW 
GTGGMQLTAA ILGADDVLKV IDQGADDTTN AVSIRRFFAR TAGIATTERT PEATVIQTRH
RIPETPLHAD QIMVYQVPIP EPLRFIEPSE TETRTMHALD DYGVMHVKLY EDIATFGHIA
TSYAYPVMVD ERYVMDPSPI PKFDNPKLHM SPALMLFGAG REKRLYAVPP YTQVVSLDFE
DHPFEVQRWE QCCAICGSHD SFLDELILDD AGTQSFVCSD TDYCAQRVKQ QENDR