Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2254 |
Symbol | |
ID | 3367769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2619171 |
End bp | 2620058 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652604 |
Product | phosphonate metabolism PhnJ |
Protein accession | YP_235335 |
Protein GI | 66045494 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3627] Uncharacterized enzyme of phosphonate metabolism |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00439967 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.789995 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCATG CACCGATGAA CACCGCACAG CAAAGGCCTG CACGGGACGA GGCCTACAAC TTCGCTTATC TGGACGAGCA GACCAAACGC ATGATTCGCC GCGCCTTGCT CAAGGCGGTG GCGATCCCCG GTTATCAGGT GCCGTTCGGC GGCCGCGAAA TGCCGCTGCC GTATGGCTGG GGCACCGGCG GGATGCAACT GACCGCGGCG ATCCTGGGCG CCGATGATGT GCTCAAGGTC ATCGACCAGG GCGCTGACGA CACCACCAAC GCGGTCTCGA TCAGGCGTTT CTTTGCCCGC ACGGCCGGCA TCGCCACCAC CGAGCGCACG CCTGAGGCGA CGGTCATCCA GACCCGTCAC CGGATCCCGG AAACACCGCT GCACGCCGAT CAGATCATGG TCTATCAGGT GCCGATTCCC GAACCGCTGC GTTTCATCGA GCCCTCGGAA ACCGAGACCC GGACCATGCA CGCGCTGGAT GATTACGGCG TCATGCACGT CAAACTCTAC GAGGACATCG CCACTTTCGG CCATATCGCC ACCAGTTACG CTTATCCAGT GATGGTCGAT GAACGCTATG TGATGGACCC GTCGCCGATT CCCAAATTCG ATAACCCCAA GCTGCACATG AGCCCGGCAC TGATGCTGTT CGGCGCGGGG CGCGAAAAGC GTCTGTACGC CGTGCCGCCG TATACGCAGG TGGTGAGCCT GGACTTTGAA GATCACCCGT TCGAGGTGCA GCGCTGGGAG CAGTGCTGTG CGATCTGTGG CAGCCATGAT TCCTTTCTCG ACGAGCTGAT TCTCGACGAT GCCGGGACGC AGAGCTTTGT CTGTTCCGAC ACCGATTACT GCGCCCAGCG CGTCAAACAG CAGGAGAACG ACCGATGA
|
Protein sequence | MTHAPMNTAQ QRPARDEAYN FAYLDEQTKR MIRRALLKAV AIPGYQVPFG GREMPLPYGW GTGGMQLTAA ILGADDVLKV IDQGADDTTN AVSIRRFFAR TAGIATTERT PEATVIQTRH RIPETPLHAD QIMVYQVPIP EPLRFIEPSE TETRTMHALD DYGVMHVKLY EDIATFGHIA TSYAYPVMVD ERYVMDPSPI PKFDNPKLHM SPALMLFGAG REKRLYAVPP YTQVVSLDFE DHPFEVQRWE QCCAICGSHD SFLDELILDD AGTQSFVCSD TDYCAQRVKQ QENDR
|
| |