| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2157 |
|---|
| Symbol | |
|---|
| ID | 3367671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 2512612 |
|---|
| End bp | 2513637 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637652506 |
|---|
| Product | inosine/uridine-preferring nucleoside hydrolase |
|---|
| Protein accession | YP_235238 |
|---|
| Protein GI | 66045397 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000654385 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.648077 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATTGA TACAGTTTTC CAGACAGTTC ATTCGTGGAG CGTTGCTCTT GTCCATTCTC
GGTACTGCTG CTGTCCAGGC GGCTGAAAAG CGTGATCTGA TCATCGATAC GGATCCAGGT
GCGGACGATG TCGTTGCACT GTTACTGGCG CTGGCGTCAC CTGAAGAGCT CAACGTGATG
GCTATCACCA CGGTGGCCGG CAATGTGCGG CTCGACAAGA CCTCGCGTAA TGCCAGGCTG
GCGCGTGAGT GGGCCGGGCG CGAAGAGGTG CCTGTGTATG CCGGTGCGCC CAAGCCGTTG
GTGCGTACCC CGATCTATGC CGAGAACGTT CACGGTCAGG AAGGTCTGCC GGGCGTGCCC
GTGCACGAGC CCGCCAAGGG CCTTGCCGAA GGCAATGCCG TCGATTACCT GATCCGCACC
CTGAGCAAGG CCAAGCCGCA TAGCATCACC ATCGCCATGC TCGGCCCGCA GACCAACCTG
GCGCTGGCCT TGGTACAGGC TCCGGAAATC ACTCAGGGCA TCAAGGAAGT GGTGGTCATG
GGTGGCGCGC ATTTCAACGG CGGCAATATC ACCCCGGTTG CCGAATTCAA TCTGTTCGCC
GACCCGCATG CCGCGCAGAT CGTTCTGGCC AGTGGTGTGA AGCTGACGTA TGTGCCGCTG
GATGTGACCC ACAAGATTCT CACCAGTGAA CAACGCCTCA AGCAGATCGC CGCACTGGGC
AACAATGCTG GCAAGCTGGT CGACGGCATT CTCAATGAAT ACGTCAAGCT GGACATGGAG
CATTACGGTT TGCCCGGCGG GCCGGTACAC GACGCCAGCG TGATTGCCTG GCTGCTCAAG
CCCGAGCTGT TTTCCGGGCG GCAGATCAAC GTGACAGTGG ACACGCGTGA GGGCATCGGT
TTTGGTCAGA CAGTGGCCGA CTGGTACGGC ACGCTCAAGC AGCCGCAGAA TGTATTCTGG
GTCGAGAACG GCGACGCTCA GGGGTTCTTC GATCTGCTGA CCGAGCGTCT GGCGCGTCTC
AAGTAA
|
|---|
| Protein sequence | MTLIQFSRQF IRGALLLSIL GTAAVQAAEK RDLIIDTDPG ADDVVALLLA LASPEELNVM
AITTVAGNVR LDKTSRNARL AREWAGREEV PVYAGAPKPL VRTPIYAENV HGQEGLPGVP
VHEPAKGLAE GNAVDYLIRT LSKAKPHSIT IAMLGPQTNL ALALVQAPEI TQGIKEVVVM
GGAHFNGGNI TPVAEFNLFA DPHAAQIVLA SGVKLTYVPL DVTHKILTSE QRLKQIAALG
NNAGKLVDGI LNEYVKLDME HYGLPGGPVH DASVIAWLLK PELFSGRQIN VTVDTREGIG
FGQTVADWYG TLKQPQNVFW VENGDAQGFF DLLTERLARL K
|
|---|
| |