| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2108 |
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| Symbol | rlmL |
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| ID | 3367622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2460168 |
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| End bp | 2462420 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637652457 |
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| Product | 23S rRNA m(2)G2445 methyltransferase |
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| Protein accession | YP_235189 |
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| Protein GI | 66045348 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.949067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00266929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCGGATC GCTACGAACT TTTCCTCACT TGCCCCAAAG GCCTTGAAGG CCTGCTTGCC
GAGGAAGCCA CTGCGCTGGG TCTGCAAGAG ACCCGTGAAC ACACCTCAGC CATTCGCGGC
TCGGCGGACA TGGAGACCGC TTACCGGCTG TGTCTCTGGT CGCGCCTGGC CAACCGCGTG
TTGCTGGTGC TCAAGCGCTT CCCGATGAAG GATGCCGAAG ACCTTTACCA CGGCGTGCTG
GATGTCGAGT GGCAGGACCA TCTCGAATCC GACGGCACCA TTGCGGTGGA ATTCAGTGGT
CATGGTTCGG GCATCGACAA CACCCATTTC GGTGCACTGA AGGTCAAGGA TGCGATCGTC
GACAAGCTGC GCACCCCGGA TGGCGAGCGT CCGTCGGTCG ACAAGATCAA CCCCGATCTG
CGCGTGCACC TGCGTCTGGA TCGCGGCGAG GCCATTCTGT CCCTCGACCT TTCCGGGCAC
AGCCTGCACC AGCGCGGTTA CCGTCTGCAG CAGGGCGCTG CACCGCTGAA GGAAAACCTC
GCCGCCGCCA TCCTGATCCG CGCTGGCTGG CCGCGTATTG CTGCCGAGGG CGGCGCGCTG
GCTGACCCGA TGTGCGGTGT CGGTACCTTT CTGGTCGAGG CCGGGATGAT CGCCGCCGAC
ATCGCGCCCA ACATCAAGCG TGAACGCTGG GGCTTCTCGG CCTGGCTGGG CCACGTCCCG
GCGCTGTGGC GCAAGCTGCA CGACGAAGCG CTGGCCCGCG CCGAGGCCGG GTTGGCCAAA
ACACCTTCGT GGATTCGCGG TTACGAAGCC GATCCTCGAC TGATCCAGCC TGGGCGCAAT
AATATCGAGC GTGCCGGCCT GAGCGACTGG ATCAAGGTCT ATCAGGGCGA AGTCGCGACC
TTCGAGCCGC GTCCCGATCA GAATCAGAAA GGCCTGGTGA TCTGCAACCC TCCGTACGGC
GAGCGTCTGG GAGATGAAGC CAGTCTGCTG TATCTCTACC AGAACCTTGG CGAGCGCCTG
CGTCAGGCGT GCCTTAACTG GGAAGCTGCG GTGTTCACCG GCGCGCCGGA CCTGGGCAAG
CGCATGGGCA TTCGCAGCCA CAAACAGTAT TCGTTCTGGA ACGGCGCCTT GCCGTGCAAG
CTGCTGCTGA TCAAGGTCAC GCCTGATCAG TTCGTGACCG GCGAGCGACG CACCCCCGAG
CAGCGTCAGA TCGAACGCGA AAACCCTGTC GAGGTTGAAG TCGTTGAGCG CAAACTCAAC
AAGAACGGCA ACCCGATCAA GCCGGAACCG GTGGTGGTCG AGCAGGCGCG CCTGAGCGAA
GGCGGGCAGA TGTTTGCCAA TCGTCTGCAA AAGAACCTCA AGCTGATGGG CAAGTGGGTG
CGTCGCGAAG GGATCGATTG CTACCGCGTG TATGACGCCG ACATGCCTGA ATACTCGCTG
GCGATCGATC TGTATCACGA CTGGGTGCAT GTTCAGGAAT ACGCAGCACC CAAGTCCATT
GATCCGGAAA AGGCGTCAGC GCGGCTGTTC GATGCGCTGG CGGCCATTCC GCAAGCACTG
AACATCGACA AGAACCGCGT GGTGATCAAG CGTCGCGAGC GTCAGAGCGG CACCAAGCAG
TACGAGCGTC AAAGCGCCCA GGGCCAGTTT CTGGAAGTCA GCGAAGGCGG CGTCAAGCTG
CTGGTCAATC TGACCGACTA CCTGGACACC GGGCTGTTTC TCGATCACCG GCCGATGCGC
ATGCGTATTC AGCGCGAGGC GTCCGGCAAG CGCTTCCTGA ACCTGTTTGC CTATACGGCG
ACGGCCAGTG TGCATGCTGC CAAGGGCGGT GCGCGCAGCA CCACCAGCGT CGACCTGTCG
CGGACCTATC TGGACTGGGC GCGTCGTAAC CTGTCGCTGA ACGGTTTCTC CGACAAGAAT
CGTCTGGAGC AGGGCGACGT GATGGCCTGG CTGCAGGCCA ACCGCGACGA GTACGACCTG
ATCTTCATCG ACCCGCCGAC GTTCTCCAAC TCCAAGCGCA TGGAAGGCAT TTTTGATGTC
CAGCGTGATC AGGTCGAGCT GATCGATCTG GCCATGGCGC GTCTGGCGCC GGGTGGCGTG
TTGTACTTCT CCAACAACTT CCGCAAGTTT GTGCTCGATG AAAACCTGAG TCAGCGTTAT
GCGGTCGAGG ACATTACCGC GCACACCATC GACCAGGACT TTGCCCGTAA CGGCAAGATC
CACCGCGCCT GGAAAATCAT GGCGCGTAGC TGA
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| Protein sequence | MSDRYELFLT CPKGLEGLLA EEATALGLQE TREHTSAIRG SADMETAYRL CLWSRLANRV
LLVLKRFPMK DAEDLYHGVL DVEWQDHLES DGTIAVEFSG HGSGIDNTHF GALKVKDAIV
DKLRTPDGER PSVDKINPDL RVHLRLDRGE AILSLDLSGH SLHQRGYRLQ QGAAPLKENL
AAAILIRAGW PRIAAEGGAL ADPMCGVGTF LVEAGMIAAD IAPNIKRERW GFSAWLGHVP
ALWRKLHDEA LARAEAGLAK TPSWIRGYEA DPRLIQPGRN NIERAGLSDW IKVYQGEVAT
FEPRPDQNQK GLVICNPPYG ERLGDEASLL YLYQNLGERL RQACLNWEAA VFTGAPDLGK
RMGIRSHKQY SFWNGALPCK LLLIKVTPDQ FVTGERRTPE QRQIERENPV EVEVVERKLN
KNGNPIKPEP VVVEQARLSE GGQMFANRLQ KNLKLMGKWV RREGIDCYRV YDADMPEYSL
AIDLYHDWVH VQEYAAPKSI DPEKASARLF DALAAIPQAL NIDKNRVVIK RRERQSGTKQ
YERQSAQGQF LEVSEGGVKL LVNLTDYLDT GLFLDHRPMR MRIQREASGK RFLNLFAYTA
TASVHAAKGG ARSTTSVDLS RTYLDWARRN LSLNGFSDKN RLEQGDVMAW LQANRDEYDL
IFIDPPTFSN SKRMEGIFDV QRDQVELIDL AMARLAPGGV LYFSNNFRKF VLDENLSQRY
AVEDITAHTI DQDFARNGKI HRAWKIMARS
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