Gene Psyr_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2103 
Symbol 
ID3367617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2454620 
End bp2455867 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content57% 
IMG OID637652452 
Productlevansucrase 
Protein accessionYP_235184 
Protein GI66045343 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.962759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00209256 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTAACA TCAATTACGT CCCTACCGTC TGGTCCCGTG CCGATGCGTT GAAGGTCAAT 
GAAAATGACC CGACCACCAC GCAGCCGCTG GTAAAACCGG ACTTCCCGGT CATGAGTGAT
AAGGTCTTCA TCTGGGACAC CATGCCGTTG CGCGAGCTTG ACGGCACGGT GGTCTCAGTC
AACGGCTGGT CGGTCATCGT CACGCTGACA GCTGATCGCC ACCCCGACGA CCCGCAGTAT
CTCGGCGCCA ACGGCCGCTA CGACATCAAG CGCGACTGGG AAGATCGTCA CGGGCGGGCG
CGCATGTGCT ACTGGTATTC GCGTACCGGC AAGAACTGGA TCTTCGGTGG CCGGGTCATG
GCCGAAGGCG TGTCGCCCAC CACCCGCGAG TGGGCGGGCA CACCGGTACT GTTGAATGAC
AAGGGTGATA TCGATCTGTA CTACACCTGC GTGACACCGG GGGCGACGAT TGCCAAAGTA
CGCGGCCGTA TCGTGACCTC CGATCAGGGC GTGGAGTTGA AAGACTTTAC CCAGGTCAAG
AAACTGTTCG AGGCCGATGG CACTTATTAT CAAACCGAAG CGCAGAACTC GACATGGAAC
TTCCGCGACC CGAGTCCGTT TATTGATCCC AATGATGGCA AGTTGTATAT GGTCTTTGAA
GGTAATGTTG CCGGCGAACG CGGTACGCAT ACCGTTGGTG CTGCAGAACT TGGCCCGGTG
CCAACCGGCC ATGAAGAAGT TGGGGGTGCG CGTTTTCAAG TGGGCTGTAT CGGTCTGGCG
GTTGCTAAAG ATCTCAGCGG TGAAGAATGG GAAATATTAC CGCCACTGGT GACTGCGGTG
GGTGTCAATG ATCAGACCGA ACGTCCGCAT TATGTCTTTC AGGACGGTAA GTATTATTTG
TTCACCATTA GTCACAAGTT TACGTATGCC GACGGTGTGA CCGGGCCGGA TGGCGTTTAC
GGTTTTGTGG GCGAGCATTT GTTCGGGCCT TACCGGCCGA TGAACGCATC CGGACTGGTG
CTGGGCAATC CGCCTGCACA GCCTTTCCAG ACGTACTCCC ACTGCGTGAT GCCGAACGGT
CTGGTGACAT CGTTCATCGA CAGCGTGCCC ACCACCGGCG ATGACTACCG TATCGGCGGC
ACCGAGGCGC CGACGGTCAG GATCCTGTTG AAAGGCGACC GCTCGTTCGT GCAGGAAGAG
TATGACTACG GCTACGTGCC GGCGATGAAG GATGTGCAAC TGAGCTGA
 
Protein sequence
MSNINYVPTV WSRADALKVN ENDPTTTQPL VKPDFPVMSD KVFIWDTMPL RELDGTVVSV 
NGWSVIVTLT ADRHPDDPQY LGANGRYDIK RDWEDRHGRA RMCYWYSRTG KNWIFGGRVM
AEGVSPTTRE WAGTPVLLND KGDIDLYYTC VTPGATIAKV RGRIVTSDQG VELKDFTQVK
KLFEADGTYY QTEAQNSTWN FRDPSPFIDP NDGKLYMVFE GNVAGERGTH TVGAAELGPV
PTGHEEVGGA RFQVGCIGLA VAKDLSGEEW EILPPLVTAV GVNDQTERPH YVFQDGKYYL
FTISHKFTYA DGVTGPDGVY GFVGEHLFGP YRPMNASGLV LGNPPAQPFQ TYSHCVMPNG
LVTSFIDSVP TTGDDYRIGG TEAPTVRILL KGDRSFVQEE YDYGYVPAMK DVQLS