Gene Psyr_2051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2051 
Symbol 
ID3367565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2397247 
End bp2397939 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content63% 
IMG OID637652400 
Productresponse regulator receiver:transcriptional regulatory protein, C-terminal 
Protein accessionYP_235132 
Protein GI66045291 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.191031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.53595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCCAGG CGACCACCAT TCTGGTCATC GACGACGAGC CGCAGATTCG CAAGTTCCTG 
CGCATCAGTC TGGCGTCGCA GGGTTACAAG GTGCTGGAAG CCGCCACGGG CGCCGAGGGT
CTGACTCAGG CTGCCTTGAA TAAACCGGAT TTGCTGGTGC TCGACCTTGG GCTGCCGGAC
ATGGACGGTC AGCAGGTGCT GAGCGAGTTT CGCGAGTGGT CGGCGGTGCC GGTGCTGGTG
CTTTCGGTGC GCGCCAGTGA GGCACAGAAA GTCCAGGCGC TGGACGCCGG CGCCAACGAC
TACGTGACCA AGCCGTTTGG CATTCAGGAG TTTCTGGCCC GGGTCAGGGC GCTGCTCAGG
CAGGCGTCGG GCAGCGATAA GCCCGAATCT GCGCTTGAGT TCGGGCCGCT CACCGTCGAC
CTCGCCTATC GGCGCGTGCT GCTCGACGGT CTCGAAGTGG CGCTGACCCG CAAGGAATAC
GCGGTGCTGG CGCAGTTGGC GCGGCATCCC GGGCGGGTCA TTACCCAGCA GCAATTGCTC
AAGGATATCT GGGGGCCTAC GCACACCGAA GACAGTCACT ATCTGCGTAT CGTGGTGGGG
CATTTGCGGC AGAAGCTGGC AGATGATCCG ACCGCTCCGC GGTTCATCCT CACCGAGCCT
GGAATAGGGT ATCGTCTGCT CGCTGATCAC TAG
 
Protein sequence
MSQATTILVI DDEPQIRKFL RISLASQGYK VLEAATGAEG LTQAALNKPD LLVLDLGLPD 
MDGQQVLSEF REWSAVPVLV LSVRASEAQK VQALDAGAND YVTKPFGIQE FLARVRALLR
QASGSDKPES ALEFGPLTVD LAYRRVLLDG LEVALTRKEY AVLAQLARHP GRVITQQQLL
KDIWGPTHTE DSHYLRIVVG HLRQKLADDP TAPRFILTEP GIGYRLLADH