| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1594 |
|---|
| Symbol | |
|---|
| ID | 3367096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1793324 |
|---|
| End bp | 1794094 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637651937 |
|---|
| Product | FKBP-type peptidyl-prolyl isomerase, N-terminal:peptidylprolyl isomerase, FKBP-type |
|---|
| Protein accession | YP_234680 |
|---|
| Protein GI | 66044839 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000532236 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0285582 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGC ATCGGTTGGC AGCGGCGATT GCCCTGGTCG GTCTGGTACT CGCAGGTTGT
GACAAGCAAG CCAGCACCGT AGAGCTGAAA ACCCCAGCAC AAAAAGCGTC TTATGGCATC
GGTCTGAACA TGGGCAAAAG CCTGGCTCAG GAAGGTATGG ATGATCTGGA TTCCAAGGCT
GTAGCCCTGG GTATCGAAGA TGCTGTTGGC AAGAAAGATC AGAAACTCAA GGACGAAGAG
CTGGTTGAAG CCTTCTCCGC GCTGCAAAAG CGTTCCGAAG AGCGTCTGGC GAAGATGAGC
GAAGAGGCTT CTGCCGCTGG CAAGAAATTC CTCGAAGAGA ACGGTAAGAA GGACGGCGTG
GTCACCACCG CTTCCGGCCT GCAGTATCAG ATCATCAAGA AAGCCGATGG CGCTCAGCCC
AAGCCTACCG ATGTTGTGAC TGTTCACTAC GAAGGCAAGC TGATCGACGG CAAGGTCTTC
GACAGTTCCG TTGAGCGCGG CAGCCCGATC GACCTGCCGG TTGGCGGTGT GATTCCGGGT
TGGGTCGAAG GTCTGCAACT GATGCACGTC GGCGAGAAGA TCAAACTCTT CATCCCGAGT
GATCTGGCTT ACGGCGCACA GAGCCCGAGC CCGGCGATCC CTGCCAACTC GGTACTGGTG
TTCGATCTTG AACTGCTGGG TATCAAGGAC CCTGCAGCGG CACCGACTCC TGGTGCTGAT
GCCGACGAAG AAGAGGCAGC TCCTGCCGCT TCGGCTCCGG CCAAGAAGTA A
|
|---|
| Protein sequence | MKQHRLAAAI ALVGLVLAGC DKQASTVELK TPAQKASYGI GLNMGKSLAQ EGMDDLDSKA
VALGIEDAVG KKDQKLKDEE LVEAFSALQK RSEERLAKMS EEASAAGKKF LEENGKKDGV
VTTASGLQYQ IIKKADGAQP KPTDVVTVHY EGKLIDGKVF DSSVERGSPI DLPVGGVIPG
WVEGLQLMHV GEKIKLFIPS DLAYGAQSPS PAIPANSVLV FDLELLGIKD PAAAPTPGAD
ADEEEAAPAA SAPAKK
|
|---|
| |