| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1353 |
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| Symbol | lpxD |
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| ID | 3366848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1533763 |
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| End bp | 1534818 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637651692 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_234442 |
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| Protein GI | 66044601 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATAA CCATCAAGCT CGGCCAGTTG GCCGAGTTCC TTGGTGCCAC GTTACGTGGC
GACAAGGATA TCGAAATCAC CGGGCTGGCC ACTTTGCAAG AGGCCGGCCC TGGTCAAGTC
AGTTTCCTGG CAAATCCCAA GTACCGTAAA TTGCTGGTCG ATACCCAGGC CACTGCCGTG
CTGCTCAAAC CTGCAGACGC CGACGGTTAC GCCGGTAATG CGCTGGTGGT TCCTGATACT
TATCTGGCCT ACGCACGCAT TTCGCATTTT TTCGATCCCA AGCCTAAAAG TAGCGCAGGC
GTTCATCCGA CGGCAGTGAT TGCCGCAGAT GCACTGATTG ATCCTGCTGC CAGCATTGGC
GCTTTTGCTG TGATCGAGAG CGGTGTGCGC ATTGCAGCAG GTGTCACCAT CGGTGCTCAC
TGCTTCATCG GCGCTCGCTG CGAGATCGGT GAAGGCGGCT GGCTGGCCCC GCGGGTAACG
CTTTACCACG ATGTGCGCAT TGGCAAGCGC GTGGTCATCC AGTCGGGTGC TGTGCTGGGT
GGCGAAGGCT TTGGCTTTGC CCAGGATAAA GGTATCTACC ACAAGGTTGC ACAGATCGGT
GGCGTCACCC TCGGTGATGA CGTCGAGGTT GGCGTCAATA CGGCGATCGA TCGCGGTGCA
CTGGCTGACA CGCGCATCGG CAATGGCGTG AAACTGGATA ACCAGATTCA GATTGCTCAC
AACGTTCAGA TTGGCGACCA CACGGCGATG GCTGCGTGTG TCGGCATTTC CGGAAGCACC
AAAATCGGCA AGCATTGCAT GCTGGCTGGA GGTGTCGGTC TGGTGGGGCA TATCGAGATT
TGCGATGGCG TTTTCATCAC CGGCATGACG ATGGTGACGC ATTCCATCAC CGAGCCGGGT
TCGTACTCGT CCGGTACGGC CATGCAGCCG GCCGCCGAGT GGCGCAAGAG TGCAGCTCGT
CTGCGCAAGA TCGATGATAT GGCGCGACGT CTGCAAAAGC TTGAAAAGGC CATAGAGACG
GTGACCTGCG CTGATAATCG CTCATCTGAT GGCTGA
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| Protein sequence | MSITIKLGQL AEFLGATLRG DKDIEITGLA TLQEAGPGQV SFLANPKYRK LLVDTQATAV
LLKPADADGY AGNALVVPDT YLAYARISHF FDPKPKSSAG VHPTAVIAAD ALIDPAASIG
AFAVIESGVR IAAGVTIGAH CFIGARCEIG EGGWLAPRVT LYHDVRIGKR VVIQSGAVLG
GEGFGFAQDK GIYHKVAQIG GVTLGDDVEV GVNTAIDRGA LADTRIGNGV KLDNQIQIAH
NVQIGDHTAM AACVGISGST KIGKHCMLAG GVGLVGHIEI CDGVFITGMT MVTHSITEPG
SYSSGTAMQP AAEWRKSAAR LRKIDDMARR LQKLEKAIET VTCADNRSSD G
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