Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1146 |
Symbol | |
ID | 3366640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1297436 |
End bp | 1298320 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637651487 |
Product | glycosyl transferase family protein |
Protein accession | YP_234238 |
Protein GI | 66044397 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.811113 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTCTT CAGAAAGTCA AAACCTCTCG CCCAGCCCTT TGGTTTCCAT CGTAGCCCCT TGCTACAACG CCGAGCGATT TCTTGAGGTC GCGATTCAGA GCATCTTTGC TCAGGACTAC AAGAATTTCG AGGTCATCGT CGTCGACGAT GGTTCTACCG ACAACAGCAT CGCCATGCTC GAGTCCCTGC AGCAACGCTA TCCGTTCCAG CTCTACCGCC AGGCCAATCA GGGCGTCAGT GCTGCCCTCA ACCATGGTCT GCGTTACGCC AAAGGCGTTT ACCTTTCCAC GCCGGACCTG GATGACATCA TGCTTCCCTC TTCGGTGCGT ATCCGTGCCG AGTACCTCGA TGAGCATCCC GCAGTAGGCT GTGTCGGCGC ATTGGTCAGC TACATGGATG GTGACGGCAA GGAAATAAAA CGTCAGTCGC GCGATTACAT CGAGCGGCTG ACGTTCGACG ACATATTGCG CGACGCGGTG GTCGTCGGTG CGCCGGTTGC TCTGTACCGC ATGAAGGCCA TCAAGGATGC AAACGGTTAT GACCCGCAGA TAAGGGTTCA GGATTTTCAG GCGACACTGA AAATCGCTCA TCTGGGCTAT GAAATTCATG TGCTCCCCGA GATCGTCACG CGCTATCGAC GTCACCCGAA CAACCTTTCA CGCAAGTACA AGGTGTTGCT TGAGGCTGAC CTGAAAAGCA TCGAGCCTTA TCGGGATCAT CGCGAATACC AGAGCGGTCG AACTCAGGCC ATCAACAAAG CCTTGAAATA CGCCGCGGTT GCGGACAAGC GATATGCCTG GAGTCTGTTG TTTTCCATCC CATGGAGGCA GATCAACAGA ACGACCTTGC GGCGCTGCAA GCGTTTGCTG TTGAGCTATC GATAA
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Protein sequence | MMSSESQNLS PSPLVSIVAP CYNAERFLEV AIQSIFAQDY KNFEVIVVDD GSTDNSIAML ESLQQRYPFQ LYRQANQGVS AALNHGLRYA KGVYLSTPDL DDIMLPSSVR IRAEYLDEHP AVGCVGALVS YMDGDGKEIK RQSRDYIERL TFDDILRDAV VVGAPVALYR MKAIKDANGY DPQIRVQDFQ ATLKIAHLGY EIHVLPEIVT RYRRHPNNLS RKYKVLLEAD LKSIEPYRDH REYQSGRTQA INKALKYAAV ADKRYAWSLL FSIPWRQINR TTLRRCKRLL LSYR
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