| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0842 |
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| Symbol | |
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| ID | 3366329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 953935 |
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| End bp | 956256 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637651180 |
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| Product | peptidoglycan glycosyltransferase |
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| Protein accession | YP_233938 |
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| Protein GI | 66044097 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000122469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACTCGAT CCCGCACCTC TCGTTCTGCA AAAAAACAAC CTCCCCGCAG CCTTAACAAG
TGGCTGGGCT GGGCGTTGAA GCTCGGTATT GTCGGCCTGG TTCTGCTCGG CGGCCTGGCC
ATTTATCTCG ATGCAATCGT CCAGGAAAAA TTCTCCGGCA AGCGCTGGAC CATCCCGGCC
AAGGTCTATG CACGGCCGCT GGAGCTGTTC GTCGGACAGA AGCTGAGCCG CGATGACTTT
CTCATCGAAC TCGACGCCCT GGGCTATCGC CGCGAAAGCG TGGCGAATGG TCCCGGCGCC
GCTGCGGTGA ACGGCAATAC CGTCGACCTC AATACGCGTG GCTTTCAGTT TTACGAAGGC
ACTGATGCAG CGCAGCAGGT GCGCGTGCGC TTTTCCGGTG ACTATGTAGC CGACCTGTCT
TCGGGCAATG GTGCCAAGCT TGCGGTGGCA CGACTCGAGC CCTTGCTGAT CGGCGGCCTG
TACCCGAAGA ATCTGGAAGA CCGGATCCTG ATCAAGCTGG ATCAGGCGCC GCCCTATCTG
CTCGACGGGC TGGTAGCGGT CGAGGACCGG GATTTCTATC ACCACTTCGG CGTGTCGCCC
AAGTCCATTG CCCGGGCGAT CTGGGTCAAT ACCTCGCAGG GGCAGATGCG CCAGGGCGGC
AGTACGCTGA CCCAGCAGTT GGTCAAGAAC TTCTACCTGA CCAATGAACG CAGCCTGACC
CGTAAGCTGA CCGAAGCCAT GATGGCCGTT CTGCTGGAGA TTCATTACAG CAAGCAGGAA
ATCCTCGAGG CCTATCTCAA CGAAGTGTTC GTCGGGCAGG ACGGCCAGCG CGCCGTTCAC
GGTTTCGGTC TGGCCAGCCA GTATTTCTTC AGCCAGCCGC TGTCCGAGCT GAAAATCCAT
CAGGTGGCGA TGCTGGTCGG ACTGGTCAAG GGGCCTTCCT TCTACAACCC GCGGCGCAAT
CCGGAGCGTG CTCTGGAGCG TCGTAATCTG GTGCTCGACC TGTTTGAGCA GCAGGGCGTC
GCCACTCCCG AAGTAGTCGC TGCTGCGAAA AAAATGCCAC TGGGTGTGAC CAAGACCGGG
ACCCTCGCCG ACAGCTCGTT CCCGGCGTTC CTCGATCTGG TCAAGCGTCA GCTGCGCGAA
GACTATCGCG ACGAAGACCT GACCGAAGAA GGGCTGCGGA TCTTTACCAG CTTCGATCCG
ATCCTGCAGA TGAAGTCCCA GGCGGCCATG GACGACACGT TCAAGAAGCT CGCCGGGCGC
AAGGGCTCTG ATGAAGTGGA GTCGGCCATG GTCGTCACCA ACCCTGAAAC CGGCGAAGTG
CAGGCGTTGA TCGGTGGGCG TGAGGCCGGG TTCTCGGGCT TCAACCGGGC GATCGACGCG
GTGCGTCCGA TCGGCTCGCT GGTCAAGCCG GCTATCTACC TGACGGCACT TGAGCGGCCA
AGCCAGTACA CCTTGACCAG CTGGATTGCC GACGAACTGT TCCAGGTCAA AGGCGCCGAT
GGCCAGATAT GGAAACCGCA GAACTACGAT CACAAGTCAC ACGGCAATAT CTTCCTGTAT
CAGGGGCTGG CGCACTCTTA CAACCTGTCG ACCGCCAAGC TGGGCCTTGA ACTGGGCATT
CCAAACGTGT TCAAGACACT GGCCAAACTG GGTGTGACGC GCGAATGGCC GACCTATCCG
TCGATGCTGC TGGGTGCGGG TGGCTTGAGT CCGATGGAAG TGGCCACCAT GTATCAGACC
ATCGCCAGCG GCGGGTTCAA TACGCCGATG CGTGGTATTC GCAGCGTGCT CACCGCGGAA
GGCGAGCCAC TCAAGCGTTA TCCGTTCCAG ATTGAACAGC GCTTCGATCC GGGTGCCATA
TACCTGGTGC AGAATGCGAT GCAGCGGGTC ATGCGCGAAG GTACGGGCAA ATCTGTTTAC
AACGTATTGC CGAGCTCGTT GAATCTGGCA GGCAAGACCG GTACCAGTAA CGACTCGCGT
GACAGCTGGT TTGCCGGGTT CAGTCAGGAC CTGCTGGCGG TGGTGTGGAT GGGGCGCGAC
GACAACGGCA AGACACCGTT TACCGGTGCC ACCGGTGCCC TGCAGGTCTG GACCAGTTTC
ATGCGCAAGG CCGGCCCGCT GCCGCTGGAC ATGGCGATGC CGGACAACGT CGTTCAGGCG
TGGGTCGATG CGCAGACCGG TCAGGGGTCG GATGCAAGCT GCCCGAATGC CGTGCAGATG
CCGTATATTC GCGGCAGTGA GCCCCAGCCC GGCGCGACAT GCGGCGGCGC TCCGGCACCT
GCCACTGAGG TGATGGACTG GGTCAAGGGT TGGTTGAACT AG
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| Protein sequence | MTRSRTSRSA KKQPPRSLNK WLGWALKLGI VGLVLLGGLA IYLDAIVQEK FSGKRWTIPA
KVYARPLELF VGQKLSRDDF LIELDALGYR RESVANGPGA AAVNGNTVDL NTRGFQFYEG
TDAAQQVRVR FSGDYVADLS SGNGAKLAVA RLEPLLIGGL YPKNLEDRIL IKLDQAPPYL
LDGLVAVEDR DFYHHFGVSP KSIARAIWVN TSQGQMRQGG STLTQQLVKN FYLTNERSLT
RKLTEAMMAV LLEIHYSKQE ILEAYLNEVF VGQDGQRAVH GFGLASQYFF SQPLSELKIH
QVAMLVGLVK GPSFYNPRRN PERALERRNL VLDLFEQQGV ATPEVVAAAK KMPLGVTKTG
TLADSSFPAF LDLVKRQLRE DYRDEDLTEE GLRIFTSFDP ILQMKSQAAM DDTFKKLAGR
KGSDEVESAM VVTNPETGEV QALIGGREAG FSGFNRAIDA VRPIGSLVKP AIYLTALERP
SQYTLTSWIA DELFQVKGAD GQIWKPQNYD HKSHGNIFLY QGLAHSYNLS TAKLGLELGI
PNVFKTLAKL GVTREWPTYP SMLLGAGGLS PMEVATMYQT IASGGFNTPM RGIRSVLTAE
GEPLKRYPFQ IEQRFDPGAI YLVQNAMQRV MREGTGKSVY NVLPSSLNLA GKTGTSNDSR
DSWFAGFSQD LLAVVWMGRD DNGKTPFTGA TGALQVWTSF MRKAGPLPLD MAMPDNVVQA
WVDAQTGQGS DASCPNAVQM PYIRGSEPQP GATCGGAPAP ATEVMDWVKG WLN
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