Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0842 |
Symbol | |
ID | 3366329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 953935 |
End bp | 956256 |
Gene Length | 2322 bp |
Protein Length | 773 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637651180 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_233938 |
Protein GI | 66044097 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000122469 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACTCGAT CCCGCACCTC TCGTTCTGCA AAAAAACAAC CTCCCCGCAG CCTTAACAAG TGGCTGGGCT GGGCGTTGAA GCTCGGTATT GTCGGCCTGG TTCTGCTCGG CGGCCTGGCC ATTTATCTCG ATGCAATCGT CCAGGAAAAA TTCTCCGGCA AGCGCTGGAC CATCCCGGCC AAGGTCTATG CACGGCCGCT GGAGCTGTTC GTCGGACAGA AGCTGAGCCG CGATGACTTT CTCATCGAAC TCGACGCCCT GGGCTATCGC CGCGAAAGCG TGGCGAATGG TCCCGGCGCC GCTGCGGTGA ACGGCAATAC CGTCGACCTC AATACGCGTG GCTTTCAGTT TTACGAAGGC ACTGATGCAG CGCAGCAGGT GCGCGTGCGC TTTTCCGGTG ACTATGTAGC CGACCTGTCT TCGGGCAATG GTGCCAAGCT TGCGGTGGCA CGACTCGAGC CCTTGCTGAT CGGCGGCCTG TACCCGAAGA ATCTGGAAGA CCGGATCCTG ATCAAGCTGG ATCAGGCGCC GCCCTATCTG CTCGACGGGC TGGTAGCGGT CGAGGACCGG GATTTCTATC ACCACTTCGG CGTGTCGCCC AAGTCCATTG CCCGGGCGAT CTGGGTCAAT ACCTCGCAGG GGCAGATGCG CCAGGGCGGC AGTACGCTGA CCCAGCAGTT GGTCAAGAAC TTCTACCTGA CCAATGAACG CAGCCTGACC CGTAAGCTGA CCGAAGCCAT GATGGCCGTT CTGCTGGAGA TTCATTACAG CAAGCAGGAA ATCCTCGAGG CCTATCTCAA CGAAGTGTTC GTCGGGCAGG ACGGCCAGCG CGCCGTTCAC GGTTTCGGTC TGGCCAGCCA GTATTTCTTC AGCCAGCCGC TGTCCGAGCT GAAAATCCAT CAGGTGGCGA TGCTGGTCGG ACTGGTCAAG GGGCCTTCCT TCTACAACCC GCGGCGCAAT CCGGAGCGTG CTCTGGAGCG TCGTAATCTG GTGCTCGACC TGTTTGAGCA GCAGGGCGTC GCCACTCCCG AAGTAGTCGC TGCTGCGAAA AAAATGCCAC TGGGTGTGAC CAAGACCGGG ACCCTCGCCG ACAGCTCGTT CCCGGCGTTC CTCGATCTGG TCAAGCGTCA GCTGCGCGAA GACTATCGCG ACGAAGACCT GACCGAAGAA GGGCTGCGGA TCTTTACCAG CTTCGATCCG ATCCTGCAGA TGAAGTCCCA GGCGGCCATG GACGACACGT TCAAGAAGCT CGCCGGGCGC AAGGGCTCTG ATGAAGTGGA GTCGGCCATG GTCGTCACCA ACCCTGAAAC CGGCGAAGTG CAGGCGTTGA TCGGTGGGCG TGAGGCCGGG TTCTCGGGCT TCAACCGGGC GATCGACGCG GTGCGTCCGA TCGGCTCGCT GGTCAAGCCG GCTATCTACC TGACGGCACT TGAGCGGCCA AGCCAGTACA CCTTGACCAG CTGGATTGCC GACGAACTGT TCCAGGTCAA AGGCGCCGAT GGCCAGATAT GGAAACCGCA GAACTACGAT CACAAGTCAC ACGGCAATAT CTTCCTGTAT CAGGGGCTGG CGCACTCTTA CAACCTGTCG ACCGCCAAGC TGGGCCTTGA ACTGGGCATT CCAAACGTGT TCAAGACACT GGCCAAACTG GGTGTGACGC GCGAATGGCC GACCTATCCG TCGATGCTGC TGGGTGCGGG TGGCTTGAGT CCGATGGAAG TGGCCACCAT GTATCAGACC ATCGCCAGCG GCGGGTTCAA TACGCCGATG CGTGGTATTC GCAGCGTGCT CACCGCGGAA GGCGAGCCAC TCAAGCGTTA TCCGTTCCAG ATTGAACAGC GCTTCGATCC GGGTGCCATA TACCTGGTGC AGAATGCGAT GCAGCGGGTC ATGCGCGAAG GTACGGGCAA ATCTGTTTAC AACGTATTGC CGAGCTCGTT GAATCTGGCA GGCAAGACCG GTACCAGTAA CGACTCGCGT GACAGCTGGT TTGCCGGGTT CAGTCAGGAC CTGCTGGCGG TGGTGTGGAT GGGGCGCGAC GACAACGGCA AGACACCGTT TACCGGTGCC ACCGGTGCCC TGCAGGTCTG GACCAGTTTC ATGCGCAAGG CCGGCCCGCT GCCGCTGGAC ATGGCGATGC CGGACAACGT CGTTCAGGCG TGGGTCGATG CGCAGACCGG TCAGGGGTCG GATGCAAGCT GCCCGAATGC CGTGCAGATG CCGTATATTC GCGGCAGTGA GCCCCAGCCC GGCGCGACAT GCGGCGGCGC TCCGGCACCT GCCACTGAGG TGATGGACTG GGTCAAGGGT TGGTTGAACT AG
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Protein sequence | MTRSRTSRSA KKQPPRSLNK WLGWALKLGI VGLVLLGGLA IYLDAIVQEK FSGKRWTIPA KVYARPLELF VGQKLSRDDF LIELDALGYR RESVANGPGA AAVNGNTVDL NTRGFQFYEG TDAAQQVRVR FSGDYVADLS SGNGAKLAVA RLEPLLIGGL YPKNLEDRIL IKLDQAPPYL LDGLVAVEDR DFYHHFGVSP KSIARAIWVN TSQGQMRQGG STLTQQLVKN FYLTNERSLT RKLTEAMMAV LLEIHYSKQE ILEAYLNEVF VGQDGQRAVH GFGLASQYFF SQPLSELKIH QVAMLVGLVK GPSFYNPRRN PERALERRNL VLDLFEQQGV ATPEVVAAAK KMPLGVTKTG TLADSSFPAF LDLVKRQLRE DYRDEDLTEE GLRIFTSFDP ILQMKSQAAM DDTFKKLAGR KGSDEVESAM VVTNPETGEV QALIGGREAG FSGFNRAIDA VRPIGSLVKP AIYLTALERP SQYTLTSWIA DELFQVKGAD GQIWKPQNYD HKSHGNIFLY QGLAHSYNLS TAKLGLELGI PNVFKTLAKL GVTREWPTYP SMLLGAGGLS PMEVATMYQT IASGGFNTPM RGIRSVLTAE GEPLKRYPFQ IEQRFDPGAI YLVQNAMQRV MREGTGKSVY NVLPSSLNLA GKTGTSNDSR DSWFAGFSQD LLAVVWMGRD DNGKTPFTGA TGALQVWTSF MRKAGPLPLD MAMPDNVVQA WVDAQTGQGS DASCPNAVQM PYIRGSEPQP GATCGGAPAP ATEVMDWVKG WLN
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