Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0839 |
Symbol | |
ID | 3366326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 950669 |
End bp | 951454 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637651177 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_233935 |
Protein GI | 66044094 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000295758 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000077294 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAAAGAGA TGACAGCAGA TGATGAGCGG CTGGCGCGTC AGGTCATCGG GCTGCTTGAG CTGTTTGCCC TCAATACAGA CGACACTGAG CAGCGCATTG TCGGCATCTG TCGGCGCGCA TGCACGCCTG TGGGACCGGT TGCAGCGGTC AGCGTCCAGC AACGTTTCGT GTGTCTGGCA CGCACCACGC TGGATCGCTT ACAGGCTCGT CATATCAAGG TCGTCGCCGT GGTCAATTTC CCTCATGGCA GCAGCAATGT TCAGTCGGTC ATCGCCCAGG TACGTGCTGC GCTGATGGCT GGCGCGGATG AAATCGACGT CGTGTATCCC TTTCGCGCGC TGCTCGGCGG AGACCGGCAG CCCGGCCTGG CGATGATCTC GGCGTGTTCG GCCTTGTGTG CCGGGCAGGT GATGCTTACA GCGACGCTTG AAACCGGTGA CTTGCGTGAC TCGCAAATGA TCCTCGACGC TTGCCGCGAT GCGATTGTTT CGGGCGCTGA CTTCATCAAG ACCAGCACCG GCAAGGCCGC CAGGCATGTC ACGCCGCAGG CTGCACGGAT CATGCTGGAG TCCATTGCCG ACGTAGGCGG GCAAGTGGGG CTGAAGGTTG CAGGCGGAAT CCGTACGTTC GACGAGGCGC GTGTTTACAT GGCACTGGTC CGCGCGCGAT TTGGCCTGCA ATGGATCAAC GCCGGGCGCT TTCGGCTGGG CGGCTCCAGC GTGCTGGACG ACTTGCTGGC AAGGCTCGGC CTGCTCGAGT CGCATGGTGG TGGCGATGGC TTTTGA
|
Protein sequence | MKEMTADDER LARQVIGLLE LFALNTDDTE QRIVGICRRA CTPVGPVAAV SVQQRFVCLA RTTLDRLQAR HIKVVAVVNF PHGSSNVQSV IAQVRAALMA GADEIDVVYP FRALLGGDRQ PGLAMISACS ALCAGQVMLT ATLETGDLRD SQMILDACRD AIVSGADFIK TSTGKAARHV TPQAARIMLE SIADVGGQVG LKVAGGIRTF DEARVYMALV RARFGLQWIN AGRFRLGGSS VLDDLLARLG LLESHGGGDG F
|
| |