Gene Psyr_0497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0497 
Symbol 
ID3365973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp539323 
End bp540087 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content66% 
IMG OID637650837 
ProductLamB/YcsF family protein 
Protein accessionYP_233605 
Protein GI66043764 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCAA TAGACCTCAA CAGTGATCTC GGTGAAAGCT TCGGCGCCTG GAGCATGGGC 
GATGACGAGG CGATTCTCGA TGTGGTCAGC AGCGCCAACG TGGCCTGCGG TTTCCATGCC
GGTGACCCGG CCGGGATCCT GCGTACCCTT GAGGCCGCTG CGGCCCGGGG CGTTGCCATC
GGCGCGCATG TGGCCTACCC GGACCTGGTA GGGTTTGGCC GCCGCAACAT GGACATCCCG
AGCGACCAAC TGACCGCCGA CGTCATTTAT CAGATCGGCG CGCTTCAGGG CCTGGCCCGC
AGCGCCGGGA CCCGCGTGAG CTACGTCAAA CCCCACGGCG CGCTGTACAA CACCATCGCT
GGTGATCAGC GTCAGGCCGC GGCGGTCATT CAGGCGCTGT TGCGCATTGA TCCCGCGCTG
AAGCTGGTGT GCCTGGCCAA CTCGCCGCTG CTCGACTGGG CACGCGAAGC CGGGCTTTCC
TGCGTCGCCG AAGCGTTCGC CGACCGCGCC TATACCGCTC AAGGCACGCT GGTCTCGCGC
TCGCGGCCCG GTGCCGTGCT GCACGATGCC GAACTGATCG CCGAGCGCAT GCTGCGCCTG
GTGCGCGAAG ACGTCATCGA GGCTGAAGAT GGCCGCGAAA TCAGCCTGCA GGCCGATTCG
ATCTGCGTGC ATGGCGACAG CCCGGGCGCG GTGAACATCG CCCGCATCCT GAAAAACCGT
TTGCACGATG CAGGCGTCAC TGTCCGCGCA TTCAATCGAG GCTGA
 
Protein sequence
MPAIDLNSDL GESFGAWSMG DDEAILDVVS SANVACGFHA GDPAGILRTL EAAAARGVAI 
GAHVAYPDLV GFGRRNMDIP SDQLTADVIY QIGALQGLAR SAGTRVSYVK PHGALYNTIA
GDQRQAAAVI QALLRIDPAL KLVCLANSPL LDWAREAGLS CVAEAFADRA YTAQGTLVSR
SRPGAVLHDA ELIAERMLRL VREDVIEAED GREISLQADS ICVHGDSPGA VNIARILKNR
LHDAGVTVRA FNRG