Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_2144 |
Symbol | |
ID | 3516132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 2647569 |
End bp | 2649266 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637670860 |
Product | putative inner membrane protein translocase component YidC |
Protein accession | YP_265425 |
Protein GI | 71066698 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0706] Preprotein translocase subunit YidC |
TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00651842 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000165557 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCAAAAGA TATTTCGGGT GATGATCATC ATTGCGATGT TAATCACCGC TTATCTGCTG ATTTTGGCAT GGCGTGATGA TTATGCAGAT GCCCCAGCTG TAGACACGGT GCCAGAAACT GCAACTTCGG TAGGGGCTGA TATTCCTTCT ACTAGCGGTG CGGCAGGTGA TATTCCAGTA CAGACGCTAC CTGTCGATAA CGGTACAGTT GATAATAGTG CTGTGACCGC CACACCTGCT ACCGATGCAG GACTAATCAC AGTCACTACT GATCGCTATG ACATCAAAAT CAATCCAGAA GGCGGTGACA TCGTTTATGC TGCGCTAAAG CAGTATGATG CAACCCTTGA TAGCGATAAG CCTTTTGTAT TGCTAGAAAA TAACAGTAAC CGCGTTTACG TGGCTCAGTC TGGTCTGATT GGTCAAAATG GTATCGATAC AGCAGAAGGT CGTGCCAAGT ACAGCCATAC CGCTAACAAT TACGTGATGG AAAAAGGTCA GCAAACGTTA TCAGTGCCGC TCACCTACAA AAAAGATGGC GTGACAATCA CTAAGACCTT TAGTTTCACT CACGATAAAT ATCCTATCGA TATCAGCTAT AAGATTCAAA ATGCTTCTAC AGCGGCGTGG CAAGGTCAGA TGTTTGCCCA GCTAAAGCGT GATGATAGTA AAGATCCTGG TATGTCTGAT AAAGGTGCGC TCAGTATGGC GACCTATTTG GGCGGCGCTT GGGGTACACC GGATGATCCC TATAATAAGC TGAAATTTGG TAACTTTAAT GATGGTGAGT TGACCACAAC CAGTGATAAA GGTTGGGTTG GTATCGTGCA GCATTACTTT GTGTCAGCAT GGACGCCTGA AAACTTTACC GGTAAATTCT TTAGCCGTGA AACAGGTGAT GATTACTTTA TTGGCTTTAA TAGTCAGCCT GTTAATGTTG CGCCAGACAA GCAAGTAACT TTGAATGCGA CGCTATATGC AGGTCCTAAG GTTCAATCTG AGCTTAAAGA TGTGGCAGCA GGATTAAATC AGACGGTCGA TTATGGTCTA TTATGGCCAA TTTCAAAGAT ACTATTTGCT CTCTTGGATG GCATTCATAA AATCATCGGC AACTGGGGTT GGTCAATCAT CCTATTGACT ATCTTGGTCA AATTCGCATT GATGTGGTTC TCAAACAAGA GCTACTATTC AATGGCGAAG ATGCGTGCGA TTGCACCGCG TCTAGCAGCG CTAAAAGAAG AACATGGCGA CGATCGCATG AAAATGTCGC AAGAAATGAT GGCAATGTAC AAAGAAGAAA AAGTCAATCC AATGGCGGGT TGTTTGCCAA TCTTGATGCA AATGCCGATT TTCTTAGCCT TATATTGGGT ACTGGTTGAA AGTATCGAGT TACGTCATGC ACCGTGGGTC TTGTGGATTC AGGATTTATC AGCGATGGAC CCGTGGTTTA TCTTGCCACT ATTGATGGGT GTGTCGATGT TTGTACAGCA GCAGCTTAAC CCGCAGCCAG CTGATCCAAT GCAAGCGAAA GTCATGAAGT TTTTACCGAT TATTTTCACC GCGTTCATGC TGTTCTTCCC AGCAGGTCTG GTCCTATATT GGACAGTGAA TAACTTATTT AGTATGACAC ATCAATATAT TGTCAATAAA AAAGTAGAAG AAGAGCAAAA GCTGCGTACC GTAAAAGTAC TCGACTAA
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Protein sequence | MQKIFRVMII IAMLITAYLL ILAWRDDYAD APAVDTVPET ATSVGADIPS TSGAAGDIPV QTLPVDNGTV DNSAVTATPA TDAGLITVTT DRYDIKINPE GGDIVYAALK QYDATLDSDK PFVLLENNSN RVYVAQSGLI GQNGIDTAEG RAKYSHTANN YVMEKGQQTL SVPLTYKKDG VTITKTFSFT HDKYPIDISY KIQNASTAAW QGQMFAQLKR DDSKDPGMSD KGALSMATYL GGAWGTPDDP YNKLKFGNFN DGELTTTSDK GWVGIVQHYF VSAWTPENFT GKFFSRETGD DYFIGFNSQP VNVAPDKQVT LNATLYAGPK VQSELKDVAA GLNQTVDYGL LWPISKILFA LLDGIHKIIG NWGWSIILLT ILVKFALMWF SNKSYYSMAK MRAIAPRLAA LKEEHGDDRM KMSQEMMAMY KEEKVNPMAG CLPILMQMPI FLALYWVLVE SIELRHAPWV LWIQDLSAMD PWFILPLLMG VSMFVQQQLN PQPADPMQAK VMKFLPIIFT AFMLFFPAGL VLYWTVNNLF SMTHQYIVNK KVEEEQKLRT VKVLD
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