| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1744 |
|---|
| Symbol | lpxC |
|---|
| ID | 3515712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 2147782 |
|---|
| End bp | 2148744 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637670440 |
|---|
| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
|---|
| Protein accession | YP_265026 |
|---|
| Protein GI | 71066299 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
|---|
| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000000048167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.132089 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTACACT ATAGCAATTG TAACAAAATA TGTGAGAAGA CAGTCATGAA CCAACGAACC
ATAAAAACAG CAATCGCCGT TACAGGTACT GGTCTTCATA GTGGTCAACC TGTTGATTTA
GAGTTTCAGC CGCAACCAAT TGATACTGGA ATCGTCTTTG AGCGTTCTGA TATTGTTGGC
AGCACACCCA TCCCTGCCAG TGCCTTTTTG GTACAAGATA CCATGATGTC ATCCAATCTG
GTATTTGGTG GTACCCGTGT CGGTACGGTT GAGCATTTGC TCAGTGCCAT AGCAGGACTT
GGTGTTGATA ATCTACTAAT TCGTGTATCA GCATCAGAGA TACCTATCAT GGATGGCAGT
GCTGCGCCAT TTGTAGGATT GTTATTACAA GCAGGTTTGT GTGAACAAGA TGCTTTAAAG
AAGTTCATTA GAATTGTACG TACTGTACGT GTCAAAGTTG ATGATAAATG GGCAGAGCTA
CGTCCTTACA GTGGATTTGA GCTGAATTTC GAGATTGATT TTGACCATCC TGCGATTGAT
AAAGATTTTC AGCATGCCCA ATTGCAGTTT TCCACACAAA ACTTCATTGA ACAATTAAGC
TCAGCACGTA CTTTTGGTTT TTTACGTGAT ATTGAAGCCA TGCGTCAGAA CAATTTGGCA
TTAGGCGGCA GCATGGACAA TGCGATTGTC ATCGATGAAG CAAATATTTT GAATGAAGAA
GGTCTACGTT TTAATGACGA ATTTGTCCGT CATAAAATTC TAGATGCACT TGGTGATTTA
TATTTGATTG GCTATCCGAT TCTAGGTCGT TTTAATGCTT ATAAATCTGG TCACGCTTTA
AATAATTTAT TGGTGCGTGA GATTTTATCC GACCACAATA ACTTTGAAAT TGTAACTTTT
GATGACAATG TAACATGTCC TATCGAATAT TTACCTTTGA ATGGTATAAC TGTCGAAGGA
TGA
|
|---|
| Protein sequence | MLHYSNCNKI CEKTVMNQRT IKTAIAVTGT GLHSGQPVDL EFQPQPIDTG IVFERSDIVG
STPIPASAFL VQDTMMSSNL VFGGTRVGTV EHLLSAIAGL GVDNLLIRVS ASEIPIMDGS
AAPFVGLLLQ AGLCEQDALK KFIRIVRTVR VKVDDKWAEL RPYSGFELNF EIDFDHPAID
KDFQHAQLQF STQNFIEQLS SARTFGFLRD IEAMRQNNLA LGGSMDNAIV IDEANILNEE
GLRFNDEFVR HKILDALGDL YLIGYPILGR FNAYKSGHAL NNLLVREILS DHNNFEIVTF
DDNVTCPIEY LPLNGITVEG
|
|---|
| |