| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1470 |
|---|
| Symbol | prmA |
|---|
| ID | 3515431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 1786992 |
|---|
| End bp | 1787918 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637670159 |
|---|
| Product | ribosomal protein L11 methyltransferase |
|---|
| Protein accession | YP_264752 |
|---|
| Protein GI | 71066025 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2264] Ribosomal protein L11 methylase |
|---|
| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.456616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000118267 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGCATGGC AACAACTGCA CTTACAGTGC GAAAAAGACA ATGTTGATCT CGCTGAGGCG
CTATTATTAG AAGCAGGCGC TCTATCTATT GCACTTGATG ACGCAGGTGA CCAACCTTTA
TTTGAGCCAC TTCCTGGTGA ATCACCACTA TGGGACGAGG TAATTTTAAC AGGGCTCTTC
GATGCCACTA CAGAGGCTGG AACCAGTCAT GTTATTGAGC AATTCAGTCA TGAAATCGCA
GCACAAGTAC AAGCAAGTCG TACTTGGGTA AGTGCTGTAG ATGACAAAGA TTGGGAACGT
GAATGGATGT CTAATTACAA GCCTATTGAG TGTGCCAATG ACTTATGGAT TGTGCCTAAT
TGGTTGACAC CACCCAATCC TGAAGCGACT AATATTATTA TGGATCCAGG CTTAGCATTT
GGTACCGGCT ACCACGCTAC TACTCGCCTA TGTCTTGATT GGCTGACTGA ACAAGACCTT
AAAGATAAAG TAGTGATAGA TTATGGCTGC GGCTCAGGAA TATTGGGTAT TGCTGCCTTA
TTATTAGGGG CGCGCCATGT TTATGCGGTG GACATTGACC CTCAAGCGGT ACTGGCAACC
AATCAAAACG CGGCACGCAA CTCGGTCGAC AATCGTTTAC AAGCATTTTT ACCAGAAGAT
TTCACTATCT TTTGTCAGCA GCAGGACATA CCAGCAGTAG AAGTCATGGT TGCCAATATT
TTAGCCAAAC CTCTAATTGG TCTAGCTCCT TATTTTGCGA CCCTCATGGC ATCAAAGAGC
CGCATCGTGC TTGCCGGTTT AATTGAGTCA CAAACTGAGC AAGTGACCGA AGCCTACCAG
CCTTATTTTG CGCTTGATCC TAAACATGCC TTTACTGCAC AAGAAGATCA GCATTGGCAG
CGATTGTCTG GTACATTTAC AGGCTAG
|
|---|
| Protein sequence | MAWQQLHLQC EKDNVDLAEA LLLEAGALSI ALDDAGDQPL FEPLPGESPL WDEVILTGLF
DATTEAGTSH VIEQFSHEIA AQVQASRTWV SAVDDKDWER EWMSNYKPIE CANDLWIVPN
WLTPPNPEAT NIIMDPGLAF GTGYHATTRL CLDWLTEQDL KDKVVIDYGC GSGILGIAAL
LLGARHVYAV DIDPQAVLAT NQNAARNSVD NRLQAFLPED FTIFCQQQDI PAVEVMVANI
LAKPLIGLAP YFATLMASKS RIVLAGLIES QTEQVTEAYQ PYFALDPKHA FTAQEDQHWQ
RLSGTFTG
|
|---|
| |