Gene Psyc_1203 details

Gene Information

• Locus tag: Psyc_1203
• Symbol: aspS
• ID: 3514101
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Psychrobacter arcticus 273-4
• Kingdom: Bacteria
• Replicon accession: NC_007204
• Strand: +
• Start bp: 1444480
• End bp: 1446306
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637669892
• Product: aspartyl-tRNA synthetase
• Protein accession: YP_264488
• Protein GI: 71065761
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0173] Aspartyl-tRNA synthetase
• TIGRFAM ID: [TIGR00459] aspartyl-tRNA synthetase, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000000000120939
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: 4
• Fosmid unclonability p-value: 0.0042207
• Fosmid Hitchhiker: No
• Fosmid clonability: decreased coverage

Sequence

Gene sequence

ATGACGCATA GCGAATACCG AGACGAATAT TGCGGAGCCG TAACCGAGAG CTTAATTGAG 
CAAACCATTA GTGTCGTAGG CTGGGTACAT CGTCGTCGCG ATCACGGTGG CGTAATTTTC 
TTAGACATGC GTGACCGCGC TGGTATCTTG CAGGTCGTTG TCGATCCTGA TACCCCAGAA 
GCGTTTGCTA CTGCTGACGC GGTACGTCCT GAATATGTAC TAAAAATCAC AGGTCGTGTT 
CGTCGCCGTT ATGAAGGCAC TGAAAACGCT AATATGACCA GTGGCCATAT CGAGCTATTG 
GCCAAAGAAA TTGAAGTGCT GGCAAAGTCT GAAACTCCGC CGTTCCCATT GAATGATGAG 
AAAAGTACGG TATCAGAAGA TTTGCGTCTC AAATATCGCT ATCTTGATAT GCGCCGTCCA 
CAAATGCAAG ATCGCATGGT ATTCCGTGCT AAAGCCACCT CAGCGATTCG TCGTTATTTA 
GATGATCATG GCTTTTTAGA CGTAGAAACC CCTATCTTGA CTCGTGCAAC GCCAGAAGGC 
GCGCGTGATT ATCTGGTCCC TTCACGTACA CGTCCGGGTA ACTTCTTTGC CTTACCGCAG 
TCGCCACAGC TGTTTAAACA GTTATTGATG GTGGCAGGTT TTGACCGCTA TTATCAAATC 
GCTAAGTGCT TCCGTGATGA AGATTTACGT GCTGATCGTC AGCCTGAATT TACCCAAGTC 
GATATTGAGA CTTCTTTCTT AAATGAAGAA GAAATCATGA ATATCAACGA AGGTCTGATT 
AAGCATGTCT TTAAGACGAT GATGGACGTT GAGTTTGAGA AATTCCCACG TATGACTTAT 
GCTGAAGCCA TGCGTGATTA TGCCTCAGAC AAGCCTGATT TACGTATTCC GCTTAAATTG 
ATTGACGTTG CTGACTTGAT GAAAGACGTT GATTTTAAAG TCTTTGCCGG TCCTGCTAAC 
GATCCTAAAG GTCGTGTTGC TGCGCTACGC ATACCAGGCG GCGCTTCATT AAGTCGTAAG 
CAAATCGATG CTTATACCAA GTTCGTTGGT ATCTATGGTG CACGTGGTTT GGCTTATATT 
AAAGTCAACG ATGCCAGCAA CATCAATAAC GGCGTGGATA AAGAATCTGG TCTACAATCT 
CCTATCATTA AGAATATGAC TGATGATGTA TTGGTAAGCC TGATTGAGCG TACTGGTGCA 
GAAAGCAATG ATATTATCTT CTTTGGTGCG GATAAAGCCA GTGTGGTGAA TGATGCCATC 
GGTGCATTAC GTCAGAAGAT TGGTCTAGAT CTAGAGATGA CCACTTGTGA GTGGGCTCCA 
CTTTGGGTAA CTGACTTTCC GATGTTTGAA GAAACTGAAG ATGGGCGCTG GACATCAATG 
CATCATCCGT TTACTAAGCC AAAAGGTTCA GTTGAAGAAT TAAAAACCAA TCCTGAATCT 
GCCCTTTCTA TCGCTTATGA CATGGTATTA AACGGTACTG AAGTTGGCGG TGGTAGTTTA 
CGTATCAATA CGCTTGAAAT GCAAACGGCC GTGTTTGAAG CATTGGGTAT CGATGATCAG 
GAAGCAGAAG ACAAATTTGG CTTCTTGCTT GACGCGTTAA AATTTGGCGC GCCGCCGCAT 
GGTGGTTTGG CATTTGGTTT GGATCGCTTA ATCATGCTTA TGGTAGGCGC AAGCTCTATC 
CGTGACGTGA TTGCTTTCCC AAAAACTAAA ACTGCTGAGT GTCCATTAAC ACAAGCACCG 
GCTGAGGTGA ATACTAAGCA GCTACGTGAG CTTGGTATCC GTGTCCGTGA AAAAGTACAA 
GCTGACACCA GCAAGCCTGC TGAATAA 

 

Protein sequence

MTHSEYRDEY CGAVTESLIE QTISVVGWVH RRRDHGGVIF LDMRDRAGIL QVVVDPDTPE 
AFATADAVRP EYVLKITGRV RRRYEGTENA NMTSGHIELL AKEIEVLAKS ETPPFPLNDE 
KSTVSEDLRL KYRYLDMRRP QMQDRMVFRA KATSAIRRYL DDHGFLDVET PILTRATPEG 
ARDYLVPSRT RPGNFFALPQ SPQLFKQLLM VAGFDRYYQI AKCFRDEDLR ADRQPEFTQV 
DIETSFLNEE EIMNINEGLI KHVFKTMMDV EFEKFPRMTY AEAMRDYASD KPDLRIPLKL 
IDVADLMKDV DFKVFAGPAN DPKGRVAALR IPGGASLSRK QIDAYTKFVG IYGARGLAYI 
KVNDASNINN GVDKESGLQS PIIKNMTDDV LVSLIERTGA ESNDIIFFGA DKASVVNDAI 
GALRQKIGLD LEMTTCEWAP LWVTDFPMFE ETEDGRWTSM HHPFTKPKGS VEELKTNPES 
ALSIAYDMVL NGTEVGGGSL RINTLEMQTA VFEALGIDDQ EAEDKFGFLL DALKFGAPPH 
GGLAFGLDRL IMLMVGASSI RDVIAFPKTK TAECPLTQAP AEVNTKQLRE LGIRVREKVQ 
ADTSKPAE