Gene Psyc_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0088 
SymbolargH 
ID3514676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp101502 
End bp102875 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content48% 
IMG OID637668772 
Productargininosuccinate lyase 
Protein accessionYP_263396 
Protein GI71064669 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGGCG GACGCTTTAG TGAAGCGACT GACAGCTTTG TTGCTGCCTT TACCGCATCG 
GTTGGCTTTG ACCAACGCTT TGCTCGCCAT GATATTCAAG GCTCAATCGC TCATGCGACC
ATGCTTAAAG AGTGCAGTAT CTTGGAAGCT GATGACGTTG CGACTATCAT TGATGGCTTA
CAACAAGTGC TGCGTGAAAT CGAAGCCGGT GAGTTTAACT GGTCGATTGC CCTAGAAGAC
GTCCACATGA ACGTCGAATC ACGCCTGACC GATATCGTCG GCGCAGTGGG CAAAAAACTG
CATACCGGAC GCAGCCGTAA TGACCAAGTG GCGACTGACA TTCGTCTTTG GTTACGTGAA
GAGACCGATA ATATCATTGC GCTATTGGTT CGCTTACAAA GTGGCTTACT TGATTTGGCT
GAGCAGCATA CCGATACCAT CATGCCAGGC TTCACCCATT TGCAAACCGC GCAGCCTGTC
AGCTTTGGTC ATCATGTCAT GGCATGGTTT GAAATGCTGT ACCGTGATAC CGAACGCTTG
GTCGATGCAC GTCGACGTAT CAATCAAATG CCTCTTGGTA GTGCCGCACT TGCTGGTACA
ACGTTCCCGA TTGACCGTAC CATTACTGCT GAACTGTTAG GGTTCGAAGG TATTTGCCAA
AACTCGCTTG ATGCCGTATC GGATCGTGAT TTTGCGATTG AGTTCACCTC GGCAGCGTCT
ATTTTGATGA TGCACATGTC ACGCATGAGT GAAGAGATTA TTTTATGGAT GTCCGCGCAA
TTTAACTTTG TGCAAATCCC TGACCGCTTT TGTACTGGCT CATCTATCAT GCCGCAAAAG
AAAAACCCTG ACGTGCCAGA GTTAGTTCGT GGTAAAGCGG CGCGCGTATT TGGGCAATTG
ATGACGTTAC TTAGCCTAAT GAAGAGTCAG CCACTTGCTT ATAATAAAGA CAACCAAGAA
GATAAAGAAC CGCTATTTGA TTGTGTTGAT ACCTTGACCG GTTCGTTATT GGCGTTTGCT
GATATGCTAC CGAATATTAC ACCCAATAAA GAAAACATGC GCGCCGCAAC GATGAAAGGG
TACGCTACTG CGACCGATTT AGCCGATTAT CTGGTGCGCA ATGGTGTTGC ATTCCGTGAT
GCTCATGAAG TCGTTGGTAA TGCCGTTGCG TTAGGCATCA AAGAAGGCGT GGATTTGAGC
GATTTATCAT TAGCACAACT ACAGCAATTT AGTAATGCGA TTGGCGATGA TGTTTTTGAC
TTTTTGACTT TAGAAGGTTC ACTTGCCGCT CGTGACCACT TGGGTGGTAC TGCGCCCAAT
CAAGTGAAGC AAGCCATCAG CCGTGGACGT ACCCGCTTAG AAGTATTTGC GTAA
 
Protein sequence
MWGGRFSEAT DSFVAAFTAS VGFDQRFARH DIQGSIAHAT MLKECSILEA DDVATIIDGL 
QQVLREIEAG EFNWSIALED VHMNVESRLT DIVGAVGKKL HTGRSRNDQV ATDIRLWLRE
ETDNIIALLV RLQSGLLDLA EQHTDTIMPG FTHLQTAQPV SFGHHVMAWF EMLYRDTERL
VDARRRINQM PLGSAALAGT TFPIDRTITA ELLGFEGICQ NSLDAVSDRD FAIEFTSAAS
ILMMHMSRMS EEIILWMSAQ FNFVQIPDRF CTGSSIMPQK KNPDVPELVR GKAARVFGQL
MTLLSLMKSQ PLAYNKDNQE DKEPLFDCVD TLTGSLLAFA DMLPNITPNK ENMRAATMKG
YATATDLADY LVRNGVAFRD AHEVVGNAVA LGIKEGVDLS DLSLAQLQQF SNAIGDDVFD
FLTLEGSLAA RDHLGGTAPN QVKQAISRGR TRLEVFA