Gene Psyc_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0065 
SymboltpiA 
ID3514151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp73127 
End bp73936 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content47% 
IMG OID637668747 
Producttriosephosphate isomerase 
Protein accessionYP_263373 
Protein GI71064646 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.914052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCTT GGGTAATTGG AAATTGGAAG CAGAATCCAG CAACGAGCCA TGACGTTGAC 
GCGCTACTGA ATGAATTATG CACTGCTATT AGTACAACTA AGCAACTTAG CCACAACAAC
TCCACGCGCT GTCAAATAAT GGTGGCACCA AGTTTTTTGC ATTTAGCAGC AGTGAGTAGT
CGCCTCAAAG ACACCTCGGT ACTATGTGCC GCCCAAGACG TCAGTGCCTA TAGTGCCAGT
GTGGGCGCCT ATACCGGTGA CTGTTCAGCC CAGCAGATTG CTGATGTTGG GGCTACATGG
ACCATCCTTG GTCACTCAGA GCGCCGTCAG TACCACCAAG AATCCAACGA TACTTTATTG
CAAAAAATGA CCCATGCTTT GACCCAAGAG TTGGGCGTAG TATTTTGTAT CGGTGAAACC
CAAGCACAAT ATGATGCCAA GCAAACGCTG CCAGTCATCG ATAGTCAGTT AGCAGTGGTC
AAAAAGCTCA TTGCTGAGCA GCCAGAAGTT ATTGATTCAT TATCGACTCG TCTCATTATT
GCTTACGAGC CGGTATGGGC GATTGGTACT GGTAAAGTAC CAACAGTGTC AGAGGTGAGT
GCCACTCATC AATATATCAA GCAAACACTG GCAGGTTTTG CCGATTCGTT ATCTAACATG
ACTGTTTTGT ATGGCGGTAG TGTCAATGCT GATAATGCAG ATAGCTTTGC TGCTGATCCT
ATGATTCATG GTGCTTTGGT TGGCGGCGCT TCACTAAAGG CAGAGAGCTT TTTGGCGATT
GTCACCGCTT TTAGTAAAGG CAGTATGTAA
 
Protein sequence
MQAWVIGNWK QNPATSHDVD ALLNELCTAI STTKQLSHNN STRCQIMVAP SFLHLAAVSS 
RLKDTSVLCA AQDVSAYSAS VGAYTGDCSA QQIADVGATW TILGHSERRQ YHQESNDTLL
QKMTHALTQE LGVVFCIGET QAQYDAKQTL PVIDSQLAVV KKLIAEQPEV IDSLSTRLII
AYEPVWAIGT GKVPTVSEVS ATHQYIKQTL AGFADSLSNM TVLYGGSVNA DNADSFAADP
MIHGALVGGA SLKAESFLAI VTAFSKGSM