Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0065 |
Symbol | tpiA |
ID | 3514151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 73127 |
End bp | 73936 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637668747 |
Product | triosephosphate isomerase |
Protein accession | YP_263373 |
Protein GI | 71064646 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.914052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCTT GGGTAATTGG AAATTGGAAG CAGAATCCAG CAACGAGCCA TGACGTTGAC GCGCTACTGA ATGAATTATG CACTGCTATT AGTACAACTA AGCAACTTAG CCACAACAAC TCCACGCGCT GTCAAATAAT GGTGGCACCA AGTTTTTTGC ATTTAGCAGC AGTGAGTAGT CGCCTCAAAG ACACCTCGGT ACTATGTGCC GCCCAAGACG TCAGTGCCTA TAGTGCCAGT GTGGGCGCCT ATACCGGTGA CTGTTCAGCC CAGCAGATTG CTGATGTTGG GGCTACATGG ACCATCCTTG GTCACTCAGA GCGCCGTCAG TACCACCAAG AATCCAACGA TACTTTATTG CAAAAAATGA CCCATGCTTT GACCCAAGAG TTGGGCGTAG TATTTTGTAT CGGTGAAACC CAAGCACAAT ATGATGCCAA GCAAACGCTG CCAGTCATCG ATAGTCAGTT AGCAGTGGTC AAAAAGCTCA TTGCTGAGCA GCCAGAAGTT ATTGATTCAT TATCGACTCG TCTCATTATT GCTTACGAGC CGGTATGGGC GATTGGTACT GGTAAAGTAC CAACAGTGTC AGAGGTGAGT GCCACTCATC AATATATCAA GCAAACACTG GCAGGTTTTG CCGATTCGTT ATCTAACATG ACTGTTTTGT ATGGCGGTAG TGTCAATGCT GATAATGCAG ATAGCTTTGC TGCTGATCCT ATGATTCATG GTGCTTTGGT TGGCGGCGCT TCACTAAAGG CAGAGAGCTT TTTGGCGATT GTCACCGCTT TTAGTAAAGG CAGTATGTAA
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Protein sequence | MQAWVIGNWK QNPATSHDVD ALLNELCTAI STTKQLSHNN STRCQIMVAP SFLHLAAVSS RLKDTSVLCA AQDVSAYSAS VGAYTGDCSA QQIADVGATW TILGHSERRQ YHQESNDTLL QKMTHALTQE LGVVFCIGET QAQYDAKQTL PVIDSQLAVV KKLIAEQPEV IDSLSTRLII AYEPVWAIGT GKVPTVSEVS ATHQYIKQTL AGFADSLSNM TVLYGGSVNA DNADSFAADP MIHGALVGGA SLKAESFLAI VTAFSKGSM
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