Gene Psyc_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0002 
SymboldnaN 
ID3514719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2125 
End bp3300 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content43% 
IMG OID637668684 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_263310 
Protein GI71064583 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000104576 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000179673 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCAATTAT CGATCAATCG AGAGTCGTTA CTAAAAGCCA TTAACTTGAT CGCCAAGGCT 
GCTGATAAAC GCCACAATAT GGTTATCTTG GGTAATATCA AGTTACAATT GTCTGAGTCA
GAGCTGGTGT TAACGGCTTC TGATTTAGAA GTAGAGCTGA CATCGACGTT GAAATTGCCT
GCTGGCGCTT GTGTGCAAGC AGGTACAACG ACGTTACCTG CGACTAAATT ACGAGATATT
TGTAAATCAT TACCTGCTCA AGCCCAAGTA AATCTGACCA CTCAAGAAAA CGAGCGCTGC
TTACTGACCA GTGGTAAAAG TCGTTTTACC TTGGGCACAT TGCCTAGCGA AGACTATCCA
AGTTTGGGTA ACCCTGAAAA TATCACGCCA TTAACTATTA GCCGTAGCCG CCTTATTGAT
TTGATTCATA AGACTCAATT TGCGATGGCG ATTCAAGATG TACGCTATTA TTTAACAGGT
ATGTTGTTTG ATGTATCGCA GCAGCAACTA ACGACCGTTG CGACCGATGG ACATAGACTG
GCATTAGCAC GTAGCGTTAT CGATGTGAAT GCTGATTTGA ATATGCAGGC TATTTTGCCC
CGTAAAGCGG TAATTGAGCT TGAACGTTTA GCTTCTGAGC TGGGTAAGAT GCTTGGCGAC
CAAGATAATG CAGTTACCTT AAGTTTCGGT CGTGAGTTTC TGCAAGTAAG TTTGCCGTTC
GGTGATGTGG ATAGTGCCGG TCAGACCAGT CAAAATCTCA TGGTGACTTT TACTGCGCGT
CTGATCGATG GTAAATTCCC TGATTATCGC CGTGTGATGC CTAGTAATAC CGATAAGCTG
GCCTTATTCA ATCAAGAGAA AATGATGGAT GTGCTGCGCC GCGTAGCGAT TTTAAGTAAT
GAAAAATCTC GCGGCGTGGT GTTTAATTTT GCAAGTGATG GCATGGTAGA AGTACGCGCT
AATAATGCTG AGCAAGATGA AGCGGTTGAG ATGATACAAG CCAAGTATCA AGGTGAACCA
ATGGAGCTGT CATTTAATGC CGCTTATTTA CAAGACGTGC TGGGTGTTAT CCAAGGTGAT
TTACAAATGC ATATGAGTCA ATCAAATGCG TCGGTATTGG TTAATCAGTT AAATGATGAG
TTCCATCAGT ATGTCATTAT GCCAATGCGT ATTTAG
 
Protein sequence
MQLSINRESL LKAINLIAKA ADKRHNMVIL GNIKLQLSES ELVLTASDLE VELTSTLKLP 
AGACVQAGTT TLPATKLRDI CKSLPAQAQV NLTTQENERC LLTSGKSRFT LGTLPSEDYP
SLGNPENITP LTISRSRLID LIHKTQFAMA IQDVRYYLTG MLFDVSQQQL TTVATDGHRL
ALARSVIDVN ADLNMQAILP RKAVIELERL ASELGKMLGD QDNAVTLSFG REFLQVSLPF
GDVDSAGQTS QNLMVTFTAR LIDGKFPDYR RVMPSNTDKL ALFNQEKMMD VLRRVAILSN
EKSRGVVFNF ASDGMVEVRA NNAEQDEAVE MIQAKYQGEP MELSFNAAYL QDVLGVIQGD
LQMHMSQSNA SVLVNQLNDE FHQYVIMPMR I