| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1909 |
|---|
| Symbol | |
|---|
| ID | 5206213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 2371635 |
|---|
| End bp | 2372726 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640600140 |
|---|
| Product | GTP-dependent nucleic acid-binding protein EngD |
|---|
| Protein accession | YP_001280799 |
|---|
| Protein GI | 148653706 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0012] Predicted GTPase, probable translation factor |
|---|
| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.186477 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTTTA ATTGTGGCAT CGTGGGCTTA CCAAACGTTG GAAAATCAAC TTTATTTAAT
GCGTTAACCA AAGCGGGTAT TGCCGCAGAA AACTTTCCAT TTTGTACCAA AGATCCTAAC
GTCGGTATCG TACCTGTACC TGATCCACGT CTAAACAAAC TGGCCGAAAT TGTAAAGCCT
GAGCGTGTAT TGCCGACCAC TATGGAATTT GTGGATATTG CTGGTCTGGT AGCTGGCGCA
TCACAAGGTG AAGGGATGGG TAACCAGTTC TTAGCCAATA TCCGTGAGAC CGATGCGATC
GCTCACGTGG TACGCTGCTT CGATGATGAC AACGTCATCC ACGTAGATGG CCGTGTCAGC
CCTATTGATG ATATCGAAAC CATCAATACT GAGCTGGCTT TGGCTGACTT AGAAGCCGTT
GAGCGTGCTA TTGTGAACTT GACTAAAAAG GCTAAGGGCA ATGACAAAGA TGCTCAAGCC
ACCCTTGATG TGTTCAAAAA AATCGAACCT TTATTGGCCG AAGGCAAAGC TGCGCGCGGT
GCCAACTTAG ATCAAGATGA GAAAAAGCTG ATTAAAAGCT ATGGCCTAAT CACTTTAAAG
CCCACCATGT ATATTGCCAA CGTCAGTGAA GATGGATTTG AGAACAATCC TTATCTTGAC
GCTGTTCGTG ACTATGCTGC CAAAGAAGAG GCAATCGTAT TGCCTTTATG CAACCAAATT
GAAGCAGAAA TCTCTCAATT AGATGAGGCA GATAAAGCCG ACTTCTTAGA GGGCATGGGC
ATGGAAGAGG CAGGTCTTGA CCAAGTCATT CGCTTGGGCT ACAAACTGCT CGATATGCAA
ACTTACTTCA CCGCTGGTGT TAAAGAAGTA CGTGCCTGGA CTGTCAAAGT GGGCGCCACG
GCACCTGAAG CGGCTGGGGT TATCCACACT GACTTTGAGC GCGGCTTCAT TCGTGCCGAA
GTGATTGCTT ATGAAGACTT CATTGAGCAT GGCGGCGAAA AAGGCGCAGC TGCTGCCGGT
AAATCTCGCT TAGAGGGCAA GACCTATATC GTCCAAGATG GCGATGTGAT GCACTTTAGA
TTTAACGTGT AG
|
|---|
| Protein sequence | MGFNCGIVGL PNVGKSTLFN ALTKAGIAAE NFPFCTKDPN VGIVPVPDPR LNKLAEIVKP
ERVLPTTMEF VDIAGLVAGA SQGEGMGNQF LANIRETDAI AHVVRCFDDD NVIHVDGRVS
PIDDIETINT ELALADLEAV ERAIVNLTKK AKGNDKDAQA TLDVFKKIEP LLAEGKAARG
ANLDQDEKKL IKSYGLITLK PTMYIANVSE DGFENNPYLD AVRDYAAKEE AIVLPLCNQI
EAEISQLDEA DKADFLEGMG MEEAGLDQVI RLGYKLLDMQ TYFTAGVKEV RAWTVKVGAT
APEAAGVIHT DFERGFIRAE VIAYEDFIEH GGEKGAAAAG KSRLEGKTYI VQDGDVMHFR
FNV
|
|---|
| |