| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1871 |
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| Symbol | |
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| ID | 5204692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2327599 |
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| End bp | 2328444 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640600102 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001280761 |
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| Protein GI | 148653668 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000100876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAT TGTTAAATAC AGTTTTAGCT CGTTCAGCCA GTTTGGTTGC CACAACGTTA
TTATGCGCCT CTCCCTTATT GAGCGCTCAT GCAGGCAACA TGTACGTCTA CAAGGATGAT
TCAGGGCAGG TTTTATTGAC CAATGTAAAA CCTTCAGATA ACAGTAAGTT CGCCAAGAAG
GTACAAGTCA CTTACGCCCC CGCGTCGCAA ACTGACACCC TTATGCAATC CAATACCCTA
ACCCTTAATC CACCCAGTTA TTACAGTAAT AATAGTAATA ACAGCAGCTC AAACCTAAAT
ACTATTGGCT CAGGCAACAA TGCCTATGAC CATTATATTT TGGCCTCTGC CAATCGAAAT
GGTATTGATC CTGGCCTATT AAAAGCCATG ATGCATACCG AATCTTCTTT TAACCCCAAC
GCCCGTTCTC CTGTTGGCGC TCAAGGCTTG ATGCAGCTTA TGCCAGCCAC TGCCCGCCGA
TTTTCGGTCA TAAATGCTTG GAATCCTGCA GAGAATATTG AAGGCGCAGC CAAATATGTG
GCTTGGTTAA GTAAGCGCTT TAATGGCAAG ATTGAGCACA TCTTAGCAGG CTATAATGCA
GGTGAAGGCA ATGTGGATAA ATATGGCGGT GTGCCTCCGT TTAGAGAGAC GCGTAATTAC
GTTCAAAGAG TGCTCAATCG TTATAATACT TTATACAAAA ATGACAGCTC TTTATTTAGA
GCTGGTGCAA CTACCGTATC TTCAGAAGTG GGCATTCAAC GTGCTACGTA TGGTGCAGGT
GCTACCTCCT TTGGTACCAC GAGCAATGGA TATACTCAAG CATCGTTTGA GACCACTTTA
CGTTAA
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| Protein sequence | MTELLNTVLA RSASLVATTL LCASPLLSAH AGNMYVYKDD SGQVLLTNVK PSDNSKFAKK
VQVTYAPASQ TDTLMQSNTL TLNPPSYYSN NSNNSSSNLN TIGSGNNAYD HYILASANRN
GIDPGLLKAM MHTESSFNPN ARSPVGAQGL MQLMPATARR FSVINAWNPA ENIEGAAKYV
AWLSKRFNGK IEHILAGYNA GEGNVDKYGG VPPFRETRNY VQRVLNRYNT LYKNDSSLFR
AGATTVSSEV GIQRATYGAG ATSFGTTSNG YTQASFETTL R
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