| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1803 |
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| Symbol | rimO |
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| ID | 5204619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2235884 |
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| End bp | 2237458 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640600028 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_001280693 |
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| Protein GI | 148653600 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.6995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCA AAAACCCAGC CGATACGGTT TCTATCTATG TGCCAGGTGC GTCCATCAAT
TCTCAAACAG CGTCAGACAG CACTCAACCT GCTGCCAGTG CTTATCACCA CAAAGCCAAC
CACAATCAAA ATCGCAGTAT AGAACAAAGT GCTCAGCAAG CCGCTGAACA GTCGCTGCAT
ACTGCCGAAA CTGTGGCGCC AAAAGTGGGC TTTGTCTCAT TGGGCTGTCC TAAGGCCTTA
GTCGACAGTG AGCGCATTAT CACTGAGCTG ACCCGTGATG GGTACCGCGT TGCCTCAGAT
TATAATGGTG CCGACTTAGT GGTCGTTAAT ACCTGTGGTT TTATTGAGTC TGCAGTGCAA
GAATCACTCG ATGCCATTGG TGAGGCACTT AATAAAAATG GCAAAGTGAT TGTCACCGGC
TGCTTGGGTA AAGATGCGCA AAAAATCCGC GACATGCACC CTGCCGTACT GGCAGTGACT
GGTGCTCACG CTTATGACGA GGTCATTACG GCAGTATCAA CACATGCCCC CATGCCTCAG
GCTATTCAAG ATAAAAAAGC TTATGATCCC AAGATTGATT TGATTGACTT AGCTGGCGTG
AAGCTCACGC CAAGTCACTA TGCTTATCTT AAAATCTCAG AGGGCTGTAA CCACCGCTGT
ACGTTTTGTA TCATTCCAAG CCTACGTGGG GACTTATTAT CACGTCCTAT TGAGCAGGTA
ATGGGCGAGG CGATGGCGCT AAAAAAAGCG GGCGTGAAAG AGATTTTAGT CATCTCACAA
GACACCTCAG CTTATGGCGT TGATTTAAAA TATAAGACCT CTTTTTGGGA CGGTATGCCG
CTTAAGTCTA AGTTTTTTGA CATGTGTCAA GCATTGGCAA AAGTAGGTAT CTGGGTGCGT
CTACATTATG TCTATCCTTA TCCGCATGTG GATAAGGTGG TCGAGCTTAT GGCCAAGCCT
GGCGACCGCG GTGGCTTACT GCCGTATTTG GACATTCCTT TGCAGCATGC CAGTCCAAGC
GTTCTAAAAG CCATGAAACG CCCTGCGCAC AGTGAAAATA CGCTGGCTCG TATTCAAAAA
TGGCGCGAAA TTAATCCCGA TATTGTGATT CGCTCTACCT TCGTGGTCGG ATTCCCAGGA
GAGACAGAAG AAGACTTTGA GTACTTGCTT GAGTGGTTAA AACAGGCCAA GCTTGATCGA
GTGGGCTGCT TTACTTATTC AGAAATTGAA GGTGCGGTGG CCAATGACTT GCCAAATCCA
GTGCCTGAAG CGATAAAACA AGAGCGTTAC GAGCGCTTTA TGGCCGTACA GCAGCAAATC
TCTGAGCAAA AACTGCAAGA AAAAGTGGGC AAAACCATGA CCGTATTGGT CGATGAGATT
GACACAGAAG AGCAAATTGC CATTTGTCGC AGCTATGCTG ATGCCCCTGA GATTGACGGC
CATGTATATG TCGATAATAT CGTGCAGAAC GGCATGATGA TGGTTAAGGT TGGTGATATG
CTGACGGTCA CCATCGATGA GGCCAGTGAG TATGATTTAT TTGCCTCTTA TGATGCGGTG
CAAGCTTTGG CTTAA
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| Protein sequence | MPSKNPADTV SIYVPGASIN SQTASDSTQP AASAYHHKAN HNQNRSIEQS AQQAAEQSLH
TAETVAPKVG FVSLGCPKAL VDSERIITEL TRDGYRVASD YNGADLVVVN TCGFIESAVQ
ESLDAIGEAL NKNGKVIVTG CLGKDAQKIR DMHPAVLAVT GAHAYDEVIT AVSTHAPMPQ
AIQDKKAYDP KIDLIDLAGV KLTPSHYAYL KISEGCNHRC TFCIIPSLRG DLLSRPIEQV
MGEAMALKKA GVKEILVISQ DTSAYGVDLK YKTSFWDGMP LKSKFFDMCQ ALAKVGIWVR
LHYVYPYPHV DKVVELMAKP GDRGGLLPYL DIPLQHASPS VLKAMKRPAH SENTLARIQK
WREINPDIVI RSTFVVGFPG ETEEDFEYLL EWLKQAKLDR VGCFTYSEIE GAVANDLPNP
VPEAIKQERY ERFMAVQQQI SEQKLQEKVG KTMTVLVDEI DTEEQIAICR SYADAPEIDG
HVYVDNIVQN GMMMVKVGDM LTVTIDEASE YDLFASYDAV QALA
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