Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0127 |
Symbol | |
ID | 5204554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 149406 |
End bp | 151688 |
Gene Length | 2283 bp |
Protein Length | 760 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640598336 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_001279037 |
Protein GI | 148651944 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.302904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACCG CCTTATTATT ATCTGGCGTG GTTGGGCTTG GCATTGCAGC GCAGTGGCTG GCTTGGTATT TAAAACAGCC GTCTATTTTA TTTTTATTGC TCATTGGCAT CTTTGTCGGT CCGGTTATGG GTTATTTCGA CCCTGATGCG GTCATTGGCG ATTTATTATT CCCTTTTATC TCTTTGGGCG TGGCCATTAT TTTATTTGAA GGCTCATTGA CCTTAGAGTT TGAAGAGATT AAGCAGCACG GTAAAGTGGT ACAAATGCTG GTGTCCTTAG GGGTAGTGAT TACTATCGCT GTGGTGGCAT TATCCACCTA CTTGTTGTTT GATGTCGATC CGCTTATCGC TTTATTGTTC GGCTCCTTAG TCTGTGTGAC CGGGCCGACG GTAATCATGC CTTTGCTGCG CAGTGTTCGG CCCAACAAAA CCATCTCCAA TATCCTAAAA TGGGAAGGCA TCATCATTGA TCCGGTAGGC GCAATCGCCG TGGTCTTGGT GTATGAATAT ATCATCTCAG GCGGAGAGGC CAACAGTATC TTCTTATTCG CTGAGATTGT GGTTATTGCC ACCGCCATCG GTATGTTTGG GGCATTCGTA TTGGCCAACT TGATCAAGCG CCATATGATT CCTGAGTTCT TACACAACGT CTTTACCTTA GCTTTTGTGC TGCTACTGTT CTCTTTATCC AACCATTTAG AACATGAATC AGGTCTACTG GCCGTGACGG TCATGGGTGT GGCTCTAGCT AACTGGAAAG GCTTTCCGCG TGAGCAAATC TTGGAGTTTA ATGAGTCATT AACCGTCTTA CTCATCTCAG TGTTGTTCAT CGTACTCGCT GCCCGTGTAG AGCTAAACAG CTTATTGAGT GTGGGCTTCC AAGGCTTGGT GCTGCTGGCC ATTGTGATGT TCGTGGCACG CCCTTTATCG GTGTGGGCAT CGTCTATGGG CTCGAACTTA AAGACCTCTG AGAAGATGAT GATCAGCTGG ATTGGGCCAC GTGGTATTGT GGCTGCTGCC ATCTCCTCTT TGTTCGCCAT TCGCTTGCAA GAGTATGATA TTCAAGGTGT TGAGCTGTTA GTACCCCTAG TGTTTATGGT GATTATCGGT ACTGTATTGA TCCAAGGCTT GGGTGCCAAA ATGGTGGGTA ACCTATTGGG CGTGCGTGAG CCTGCCAGCA ATGGTGTACT GATTGTCGGC TCAAACCCTG TGGCCTTAAA AGTGGCTGAA TCTCTACAAG ACCAAGGCTT CGATGTATTG GTGGCGCACA ATAACTACAC CAATATTGCT AAAGCACGTA TGTCTGGCCT ACGCACCTAC TTTGGTAACC CCATCTCAGA CCATGCCGAT CGGCATTTGG ATTTGATTGG TATTGGCCAT TTATTTGCGA TGAGCACCGA TAAGGAGATG AATACCTTAT CTGAGCTGCA TTACCGTCAT GAATTTGGCG AACAAAAAAT TTACCGTCTA AAATTCACTG AAGATAAGGC CAAAACCGAA CGCGAAACCC GCCGTGCCAA CTTCACCTCA CGCTGGCTGT TCGGTAAAGA TGCCACCTAT ACCAAGATGG CCAGTATGCT GTCTAAAAAG GCACGCATCA AAATCACCAA CATTACCGAC AGCTATAGCT ACAGCCAGTA TCGCGCCGAT AATAAGCAAT TTGTCCCCTT ATATACCATT GATAAAGAAG GTCATTTGCA TGTGATTACC GACAGCTTTG AAAATGACAT TCCTCGTGAT CACAAGCTGG TAGCGCTCGT CATTGAAGAT GAAGTACAGC CTAAAACAGT CGATGTCACA GAAAAGCAAA ATCAGGCCCG TGCTTTGGCC GACTTGCAGT TTGAATCTAC CTCCAAAGCG CCTGAAAAAC GCAAAGAAAA GACCCTCAAT GAAGATGTGC GTGACCCCAA CTATGGCGCC CAAGCGGCCA CGACTCCTGC CAAAGCTGAA TCTAAACTGG CCGCCTCTGA CGTCCAAACA GCAGCCGTTG ATAGCCAAGT GGTTCAAGAC ACAGCTCATG CAAACACGGC ATCGAAGTCG GCAGCCTCTA CGCTACCGGC CACTCAGCTT GAGGCAGATC TGGCCAATAA GCTTGAGCAA AGCCTACAAA AGCACTCTGA CAGTGCCACA GCTGCCCCCA AAGTGAGCAA AGCGGCCTCC GTAAAATCAC TACAGTCACA GGACAATGGC AATTCACAAG CACCCAGACA ACCTGATGGG TCACTAGATC CGCAGCGTCT GCCTGATACC CATGCCAAAA ATAGCTCAGA TAAATTGTCT TAA
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Protein sequence | MDTALLLSGV VGLGIAAQWL AWYLKQPSIL FLLLIGIFVG PVMGYFDPDA VIGDLLFPFI SLGVAIILFE GSLTLEFEEI KQHGKVVQML VSLGVVITIA VVALSTYLLF DVDPLIALLF GSLVCVTGPT VIMPLLRSVR PNKTISNILK WEGIIIDPVG AIAVVLVYEY IISGGEANSI FLFAEIVVIA TAIGMFGAFV LANLIKRHMI PEFLHNVFTL AFVLLLFSLS NHLEHESGLL AVTVMGVALA NWKGFPREQI LEFNESLTVL LISVLFIVLA ARVELNSLLS VGFQGLVLLA IVMFVARPLS VWASSMGSNL KTSEKMMISW IGPRGIVAAA ISSLFAIRLQ EYDIQGVELL VPLVFMVIIG TVLIQGLGAK MVGNLLGVRE PASNGVLIVG SNPVALKVAE SLQDQGFDVL VAHNNYTNIA KARMSGLRTY FGNPISDHAD RHLDLIGIGH LFAMSTDKEM NTLSELHYRH EFGEQKIYRL KFTEDKAKTE RETRRANFTS RWLFGKDATY TKMASMLSKK ARIKITNITD SYSYSQYRAD NKQFVPLYTI DKEGHLHVIT DSFENDIPRD HKLVALVIED EVQPKTVDVT EKQNQARALA DLQFESTSKA PEKRKEKTLN EDVRDPNYGA QAATTPAKAE SKLAASDVQT AAVDSQVVQD TAHANTASKS AASTLPATQL EADLANKLEQ SLQKHSDSAT AAPKVSKAAS VKSLQSQDNG NSQAPRQPDG SLDPQRLPDT HAKNSSDKLS
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