Gene Pput_5311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5311 
SymbolrnpA 
ID5190981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5959201 
End bp5959605 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content58% 
IMG OID640589794 
Productribonuclease P 
Protein accessionYP_001270613 
Protein GI148550511 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0594] RNase P protein component 
TIGRFAM ID[TIGR00188] ribonuclease P protein component, eubacterial 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0346243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAGTC AGGACTTCAG TCGGGAAAAG CGACTGCTTA CACCCCGGCA TTTCAAAGCG 
GTCTTCGACT CCCCAACCGG CAAGGTTCCA GGGAAAAACC TGCTGATCCT TGCTCGCGAG
AACGGCCTCG ATCACCCACG CCTTGGCTTG GTAATCGGCA AGAAGAGTGT CAAGCTCGCC
GTTCAACGCA ACCGCCTCAA GCGCTTGATG CGCGATTCCT TTCGTCTGAA CCAGCAATTG
CTTGCCGGCC TGGACATCGT GATCGTCGCG CGCAAGGGAT TGGGTGAGAT AGAAAACCCG
GAATTGCACC AACACTTTGG CAAGCTCTGG AAACGCCTGG CGCGCAGCCG GCCGACACCA
GCAGTCACCG CCAATTCCGC AGGGGTAGAC AGCCAAGATG CGTAA
 
Protein sequence
MVSQDFSREK RLLTPRHFKA VFDSPTGKVP GKNLLILARE NGLDHPRLGL VIGKKSVKLA 
VQRNRLKRLM RDSFRLNQQL LAGLDIVIVA RKGLGEIENP ELHQHFGKLW KRLARSRPTP
AVTANSAGVD SQDA