Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5311 |
Symbol | rnpA |
ID | 5190981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5959201 |
End bp | 5959605 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640589794 |
Product | ribonuclease P |
Protein accession | YP_001270613 |
Protein GI | 148550511 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0594] RNase P protein component |
TIGRFAM ID | [TIGR00188] ribonuclease P protein component, eubacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0346243 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGAGTC AGGACTTCAG TCGGGAAAAG CGACTGCTTA CACCCCGGCA TTTCAAAGCG GTCTTCGACT CCCCAACCGG CAAGGTTCCA GGGAAAAACC TGCTGATCCT TGCTCGCGAG AACGGCCTCG ATCACCCACG CCTTGGCTTG GTAATCGGCA AGAAGAGTGT CAAGCTCGCC GTTCAACGCA ACCGCCTCAA GCGCTTGATG CGCGATTCCT TTCGTCTGAA CCAGCAATTG CTTGCCGGCC TGGACATCGT GATCGTCGCG CGCAAGGGAT TGGGTGAGAT AGAAAACCCG GAATTGCACC AACACTTTGG CAAGCTCTGG AAACGCCTGG CGCGCAGCCG GCCGACACCA GCAGTCACCG CCAATTCCGC AGGGGTAGAC AGCCAAGATG CGTAA
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Protein sequence | MVSQDFSREK RLLTPRHFKA VFDSPTGKVP GKNLLILARE NGLDHPRLGL VIGKKSVKLA VQRNRLKRLM RDSFRLNQQL LAGLDIVIVA RKGLGEIENP ELHQHFGKLW KRLARSRPTP AVTANSAGVD SQDA
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