| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5251 |
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| Symbol | |
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| ID | 5192403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5895029 |
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| End bp | 5896558 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589734 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001270553 |
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| Protein GI | 148550451 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.519291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGAGT CGCCCCTCAT CCTGCCTTTC GACCCTGCCG GGATCGCCCT GGATCGCAGC
CGCGGGCTTA GCCAGCAGCT GTATCAGGTG TTGCGAGCGC GGGTACTGGA TGGGCGCCTG
AGCAGTGGTA CTCGCCTGCC GGCTACGCGC GACCTGGCTG CCATGTTGGC GCTTTCACGC
AACAGCGTGG TGCGCGCCTA CGATCAACTG TATGCCGAGG GCTTCATCGA AAGCCGGGTA
GGTGATGGCA CCTACGTTAG CCGGCTGCCG AAACTGTCCA CACAAGTATC CACAGGGTTA
TCCCTGGGCT TATCAACAGG TTTATCCACA TTTCGTGAAG AAAATACTGA GGATTTATCC
AGCGGGAGGC TTTTAGGCGC ACCTCTGCAG CGCCTGAAAA ACAACCATTT GCCACCGCCC
AGAAGCGGTG CGCCGCGTGC TTTTCGCGTT GGCATTCCGG CGTTTGACCT GTTCCCGTTT
GACGTCTGGG CCAAGCTACA GGCGGGTTTC TGGCGCAACC CGTCCCCTGC GCAACTGGGC
TATGGTGACC CCGCTGGCGA GCCGGCTTTG CGCGATCTGA TAGCGGCCTA TCTACGCCGC
TCGCGGGGGC TGAGCTGTAC GGCTGAACAA ATTGTGATCA CAGGCGGTGC GCAGCAGGCC
ATCAGCCTTT GTGCACAGTT GCTGCTGCAA CCGGGCGACG GTGTGGCTGT GGAAAACCCA
GGCTATCGGG CGGCCGCTCA TGCCTTCACG CTCGCGGGCG GCCGGGTGTG TGGCGTGCCT
GTGGATGAAG ACGGGCTGGA CTGCAGCCGG CTGGAACAAT TGACGGATTG CCGACTGACC
TATGTCACGC CTGCGCACCA ATACCCGACC GGGGTGACCA TGAGCCTTGC ACGTCGCCTG
GCATTGCTGG CCTGGGCTGA ACGCAGTGAC GGCTGGATCA TCGAGGACGA CTACGACGGC
GAGTATCGCT ACAGCGGTGC ACCGCTGGCC CCGCTGGCAG CGCTCGACCG GCACGGGCGG
GTGCTGTATG TCGGCACCTT CGGCAAGATC GCCTTCCCGG CGTTGCGTCT GGGCTACCTG
GTGCTTCCGT CGAAGCTGGT GCAGGCTTTC AGCCAAGGCA AAGCGTTGGT AATGCGGCAT
TCGGAGGTCA GCAGTCAGTG CGTGATGGCC GAGTTCATGG CCCGTGGCCA TTTTCAGCGG
CATATCCGCC GTATGCGCAA GGCGGCATTG AAGCGGCGCG ATGTGCTCAA GGCCGGTTGG
CCTGTGGATA TTCCGGGGTT GGGCGCAATG CCGGAAGTGG CGGCTGGGCT GCATGTGAAG
GTCGATGTGG ATAACTTTGC TCGGGAGCAG GAGTTGGTGG CCACGGCTGA AGCGGTGGGG
GTGGAAGTGA CACCACTGAG CAATTTCTGG TTGGCGGACT GCGAGGTGCC TGTGGATAAG
CGGGCAGGGC TGGTACTGGG CTTTGCGGCA GTGCCGGAGG GCGAGATTGC TGAAGCCTTG
ATGAAACTAC GCAAAGTCTG GAGAAAATGA
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| Protein sequence | MRESPLILPF DPAGIALDRS RGLSQQLYQV LRARVLDGRL SSGTRLPATR DLAAMLALSR
NSVVRAYDQL YAEGFIESRV GDGTYVSRLP KLSTQVSTGL SLGLSTGLST FREENTEDLS
SGRLLGAPLQ RLKNNHLPPP RSGAPRAFRV GIPAFDLFPF DVWAKLQAGF WRNPSPAQLG
YGDPAGEPAL RDLIAAYLRR SRGLSCTAEQ IVITGGAQQA ISLCAQLLLQ PGDGVAVENP
GYRAAAHAFT LAGGRVCGVP VDEDGLDCSR LEQLTDCRLT YVTPAHQYPT GVTMSLARRL
ALLAWAERSD GWIIEDDYDG EYRYSGAPLA PLAALDRHGR VLYVGTFGKI AFPALRLGYL
VLPSKLVQAF SQGKALVMRH SEVSSQCVMA EFMARGHFQR HIRRMRKAAL KRRDVLKAGW
PVDIPGLGAM PEVAAGLHVK VDVDNFAREQ ELVATAEAVG VEVTPLSNFW LADCEVPVDK
RAGLVLGFAA VPEGEIAEAL MKLRKVWRK
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