| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5076 |
|---|
| Symbol | |
|---|
| ID | 5194684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 5703275 |
|---|
| End bp | 5704147 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640589559 |
|---|
| Product | sulfate ABC transporter, inner membrane subunit CysW |
|---|
| Protein accession | YP_001270378 |
|---|
| Protein GI | 148550276 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4208] ABC-type sulfate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00969] sulfate ABC transporter, permease protein
[TIGR02140] sulfate ABC transporter, permease protein CysW |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.10666 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGTT CATCCCTGAG TGCAAGTGCC GCAGCCAACG CCGCCCGCCG TGGCAGCGCC
ACGTCACGGC GTATCCTGAT CGGCCTTGGC TGGCTGGTGT TCGCCCTGTT CCTGCTGCTG
CCGCTGGTGA TCGTGGTATC GCAGGCACTG AAGAACGGTT TTGGCACCTT CTTCGAGGCG
ATCTTCGAAC CCGATGCGTT GTCGGCGCTG AAGCTGACCC TGCTCGCCGT GGTTATCTCG
GTGCCGCTGA ACCTGGTATT TGGCGTAAGC GCTGCCTGGT GCGTGAGCAA GTACACCTTC
CGTGGCAAGA GCATCCTGGT CACCCTGATC GACCTGCCGT TCTCGGTGTC ACCCGTGATT
GCCGGCCTGG TCTACGTGCT GATGTTCGGC GCGCAAGGCC TGTTCGGTCC GTGGCTGCAG
GACCACGATA TCCAGATCGT GTTCGCCCTG CCGGGCATTG TCCTGGCGAC CATTTTCGTT
ACCGTACCGT TCGTGGCCCG TGAGCTGATC CCGCTGATGC AGGAGCAAGG CACGCAGGAG
GAGGAGGCTG CACGGCTGCT CGGTGCCAAC GGCTTGCAGA TGTTCTGGCA CGTGACCCTG
CCGAACATCA AATGGGGGCT GATCTACGGC GTGGTGCTGT GTACCGCGCG GGCCATGGGC
GAGTTCGGTG CGGTGTCGGT GGTGTCGGGC CACATCCGTG GCGTGACCAA CACCTTGCCG
CTGCATGTGG AGATTCTCTA CAACGAGTAC AACCACGTCG CAGCCTTCAG CGTGGCCAGC
CTGTTGCTGA TCCTGGCGCT CTTCATCCTG CTGCTCAAGC AGTGGAGCGA GAACCGTATT
AACCGCCTGC GCCATAGCGC CGCGGAGGAA TGA
|
|---|
| Protein sequence | MSSSSLSASA AANAARRGSA TSRRILIGLG WLVFALFLLL PLVIVVSQAL KNGFGTFFEA
IFEPDALSAL KLTLLAVVIS VPLNLVFGVS AAWCVSKYTF RGKSILVTLI DLPFSVSPVI
AGLVYVLMFG AQGLFGPWLQ DHDIQIVFAL PGIVLATIFV TVPFVARELI PLMQEQGTQE
EEAARLLGAN GLQMFWHVTL PNIKWGLIYG VVLCTARAMG EFGAVSVVSG HIRGVTNTLP
LHVEILYNEY NHVAAFSVAS LLLILALFIL LLKQWSENRI NRLRHSAAEE
|
|---|
| |