| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4308 |
|---|
| Symbol | |
|---|
| ID | 5193995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4818715 |
|---|
| End bp | 4819407 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640588785 |
|---|
| Product | uracil-DNA glycosylase |
|---|
| Protein accession | YP_001269616 |
|---|
| Protein GI | 148549514 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0692] Uracil DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACG ACGATCGCAT CAAACTCGAA CCCAGCTGGA AGGCCGCATT GCGCGGTGAA
TTCGACCAGC CTTACATGCA CCAGCTGCGC GAATTTCTGC GTGGCGAGTA CGCTGCCGGC
AAGGAAATCT ACCCGCCAGG GCCGCTGATC TTCAATGCGC TCAATTCGAC ACCGTTGGGC
CAGGTGAAGG TGGTCATCCT CGGTCAGGAC CCGTATCACG GGCCGGGGCA GGCCCATGGC
CTGTGCTTCT CGGTGCAACC GGGCGTGGCC ACGCCGCCGT CGCTGGTCAA TATCTACAAG
GAGCTGCAGC GCGACCTGAA CATCCCGATC CCCAGCCACG GCTACCTCCA GAGCTGGGCA
GAACAAGGCG TTCTGTTGCT CAACACGACC ATGACAGTCG AGCGCGCCAA TGCCGCGTCG
CATGCCAAGA AAGGCTGGGA ATTGTTTACC GACCGGATCA TTCAAGTGGT CAGTGAGCAA
TGCCCGAACG TGGTATTCCT GCTATGGGGG GCGCACGCAC AGAGCAAGCA GAAGCTGATC
GACGGTACCA AGCACCTGGT ACTGAAGTCG GTCCATCCTT CGCCGCTGTC GGCGTACCGC
GGGTTCATCG GTTGCGGGCA TTTCAGCCGT ACCAACAGCT TCCTCGAACA GCGGGGACTC
GGGCCCATCG ACTGGGCACT GCCCCCGCTG TGA
|
|---|
| Protein sequence | MTDDDRIKLE PSWKAALRGE FDQPYMHQLR EFLRGEYAAG KEIYPPGPLI FNALNSTPLG
QVKVVILGQD PYHGPGQAHG LCFSVQPGVA TPPSLVNIYK ELQRDLNIPI PSHGYLQSWA
EQGVLLLNTT MTVERANAAS HAKKGWELFT DRIIQVVSEQ CPNVVFLLWG AHAQSKQKLI
DGTKHLVLKS VHPSPLSAYR GFIGCGHFSR TNSFLEQRGL GPIDWALPPL
|
|---|
| |