| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3840 |
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| Symbol | |
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| ID | 5194410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4319674 |
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| End bp | 4322031 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588312 |
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| Product | histidine kinase |
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| Protein accession | YP_001269148 |
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| Protein GI | 148549046 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0989388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.369399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCGC AGCGCAAGGA ACGGGAAACC GGCTCGGGAC TCATGGATAT CAAGTTCACC
AATCGCCTGT CATACAAGCA AGCCCGGTTG ACAGTCCTGG TCGGCTTCAT CCTGGGAACA
TTGCTCAGTC TCATCCAGAT CGGCATCGAT TATGCCAGCG AAGACGCGTC CATCAACCGT
GAAGTGAACG CGTTGCTGCA AATCAGCCAC AACCCGGCCT CGCGCATCGC CTACAACATC
GACTCGGAAC TGGCGCTGGA GCTGACCCGC GGCCTGCTGC AGTCGCCGGC CGTCATCCGC
GCACGGCTGA TCGACAACAA CGAAACGGTA CTGGCCGATG TCGAGCGGCC AAAACTGCAG
GACCGCTCCC GGCCACTCAG CGACTTCCTG TTCGGCGAGC AACGCCAGTT CAAGGAGCGC
CTGTACCTGA CCCACATGCC AGAGCAATAC CTGGGCACCC TGTACCTGGA CATCGACACC
TTCGCCTTCG GCAGCCGCTT TCTCGACCGT GCCGGCATCA CCCTGCTCAA TGGCTTTGCC
CGCAGCCTGG TGCTCACCGG CCTCCTGCTG GCGCTGTTCT ACATGATGCT GACCAAGCCG
CTGGTGACGG TGATTGGCGC ACTCAGCGGC AGCGACCCGC GCAAACCCCG GCAAACGCGC
CTGGAATGCC CACACGGACA TGAGCATGAC GAAATCGGCG TGCTGGTGAA GGTCGCCAAC
CAGCAGTTCG TCAGCATGGC CACCGAGATC GAACAGCGGC GCACTGCGGA AAACCGTCTG
ACCCAGTACC TGAACGAGCT GGAAGACATC GTGTCGGCGC GCACCAACGA GCTCAAGGCC
AGCAACAGCA GCCTGAGCCT GTCCAACCAG GAGCTGGAAC AAGCCCGCAG CCGAGCGCTG
GACATGGCCC AGGCTCGCGC CGCCTTCCTG GCCAACATGA GCCATGAAAT CCGCACCCCG
CTCAACGGCA TGCTGGGCAT GATCGCCCTG GCGCTGGACA ACCCGCTGCC CAGCGAGCAA
CGCCAGCAAC TGGCTATCGC CCATGACTCG GGCAAGGTGC TGGTAGAGCT GCTGAACGAT
ATTCTCGACT TGTCCAAGTT CGATGCCGGC CAGCTGGAAC TGGAACGCAT TGCGTTCGAC
ATGGGCTCGA TGGTGGAAGA CACCGCCAAC CTGCTGTCGC AGAACACCGC GCAAAGCGTG
GAGCTGACCT GCCTGATCGC CAGCGACTTC CCCAGCAGCG TGCTCGGCGA CCCCACGCGT
GTGCGGCAGA TCGTCAGCAA CCTGCTGTCC AACGCGCTGA AGTTCACCCG CTTCGGCCGT
GTCGATGTGC GCTTGATGGC CATTGTCGGT GGTGTACGTC TTGAGGTACG GGATACCGGC
ATCGGCATCC CCGAAGACGC CCAGGCGCGC ATCTTCCAGC CCTTCACCCA GGCCGGTGCC
GGCATCACCC GCCAGTACGG TGGCACCGGC CTGGGCCTGG CGTTGACGCG CAACCTGTGC
AAGGCCATGC AGGGCCACCT GCACATTCGC TCCGAGCCGG GCTTTGGCAG CTGTTTTACC
GCCGAGTTGC CGCTGACCGT GCACACCGAA GCCATCCCGC CAGCGCCCTT GCATGGCCGC
GTGGCCGCAC TGAGCGCAGC CGGCAGCGGG CTCAATGAAC TGTTGCAGCA CTTGCTGCCT
GCCTGGGGCC TGACCTACCA GCGCCATGAC AGTTGCGCCA CGCTGGATGC CGCAGTGATC
GACCTGTTGA TCACCGACGA CGTCGAGCAC CTGTTCGAAC TGCGCCCGGC ATTGAAAACC
CCAATCCTGC TGGTGACTGC CTACGGCAAT TTCCTGCCCA ACGAGCAGTC CTTGGCCTTG
GCCCCGCTGC ACCAGCTGGC CCGACCATTG GCACGCAACG CCCTGTACCA GACCCTGCGC
CGCACCTTGC AAGGCCATGA GCCCGAACAC CCGCTGGCCA TCCCGGCCAT TACCCAGGAG
CAAGGCCGTG CGAGGATCCT GCTGGTAGAG GACAACCCGG TGAACCAGCT GGTGGCCAAG
GGCATGCTGG CCAAGCTCGG CTGCCAGGTG CAACTGGCCA CCCAGGGCGC GGAGGCCCTT
GAGCTGCTGG CGCGTGAGGA ATTCGACCTG GTACTGATGG ACTGCAACAT GCCGGTGATG
GACGGCTACG AGGCCAGCCG GCGTATCCGC CAAAGCGGCC GCTGGCCCGA GTTGCCGATC
GTCGCCCTCA CCGCCAACGC CATGCCCGAA GAGCGCGAAC GCTGCCGGGC GGCGGGCATG
AACGACTACC TGGCCAAGCC ATTCCGCCGC GAAGAGCTAC TGGCCCTGGT TGACCATTGG
GTGCCCTTCA GCGGCTGA
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| Protein sequence | MLAQRKERET GSGLMDIKFT NRLSYKQARL TVLVGFILGT LLSLIQIGID YASEDASINR
EVNALLQISH NPASRIAYNI DSELALELTR GLLQSPAVIR ARLIDNNETV LADVERPKLQ
DRSRPLSDFL FGEQRQFKER LYLTHMPEQY LGTLYLDIDT FAFGSRFLDR AGITLLNGFA
RSLVLTGLLL ALFYMMLTKP LVTVIGALSG SDPRKPRQTR LECPHGHEHD EIGVLVKVAN
QQFVSMATEI EQRRTAENRL TQYLNELEDI VSARTNELKA SNSSLSLSNQ ELEQARSRAL
DMAQARAAFL ANMSHEIRTP LNGMLGMIAL ALDNPLPSEQ RQQLAIAHDS GKVLVELLND
ILDLSKFDAG QLELERIAFD MGSMVEDTAN LLSQNTAQSV ELTCLIASDF PSSVLGDPTR
VRQIVSNLLS NALKFTRFGR VDVRLMAIVG GVRLEVRDTG IGIPEDAQAR IFQPFTQAGA
GITRQYGGTG LGLALTRNLC KAMQGHLHIR SEPGFGSCFT AELPLTVHTE AIPPAPLHGR
VAALSAAGSG LNELLQHLLP AWGLTYQRHD SCATLDAAVI DLLITDDVEH LFELRPALKT
PILLVTAYGN FLPNEQSLAL APLHQLARPL ARNALYQTLR RTLQGHEPEH PLAIPAITQE
QGRARILLVE DNPVNQLVAK GMLAKLGCQV QLATQGAEAL ELLAREEFDL VLMDCNMPVM
DGYEASRRIR QSGRWPELPI VALTANAMPE ERERCRAAGM NDYLAKPFRR EELLALVDHW
VPFSG
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