Gene Pput_3224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3224 
SymbolinfC 
ID5195049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3635823 
End bp3636374 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content53% 
IMG OID640587669 
Producttranslation initiation factor IF-3 
Protein accessionYP_001268534 
Protein GI148548432 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.51494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTA AGCGTGAAAT GAGAAACGAT AAGCGTGCTG TACCGAAGGC CCCGATCAAC 
GAGAATATCT CGGCCCGCGA GGTTCGGTTA ATTGGCGCAG ACGGCGAGCA GGTTGGCATC
GTCTCGATTG ATGAAGCGCT GCGTATCGCT GATGAAGCGA AGCTGGACCT GGTAGAAATC
TCTGCAGACG CGGTACCACC CGTCTGCAAG GTCATGGACT ACGGCAAGCA CCTCTTCGAG
AAGAAGAAGC AGGCTAACGA AGCCAAGAAA AACCAGAAGC AGATCCAGAT CAAAGAAATC
AAGTTTCGTC CAGGGACGGA GGATGGGGAT TACCAGGTAA AACTACGCAA CCTGGTACGT
TTCCTTACCG ATGGGGACAA GGCCAAGATC TCTCTGAGAT TCCGTGGTCG TGAGATGGCC
CACCAGGAGC TGGGCATGGA GCTGTTGAAG CGGGTCGAAG CCGACCTCGC CGAATACGGC
ACCGTTGAGC AGCATCCGAA GATGGAAGGA CGCCAGCTTA TGATGGTCAT CGCCCCCAAG
AAAAAGAAGT AA
 
Protein sequence
MTIKREMRND KRAVPKAPIN ENISAREVRL IGADGEQVGI VSIDEALRIA DEAKLDLVEI 
SADAVPPVCK VMDYGKHLFE KKKQANEAKK NQKQIQIKEI KFRPGTEDGD YQVKLRNLVR
FLTDGDKAKI SLRFRGREMA HQELGMELLK RVEADLAEYG TVEQHPKMEG RQLMMVIAPK
KKK