| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2812 |
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| Symbol | |
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| ID | 5190235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3193287 |
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| End bp | 3194288 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640587262 |
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| Product | bile acid:sodium symporter |
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| Protein accession | YP_001268128 |
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| Protein GI | 148548026 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0385] Predicted Na+-dependent transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.885659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.695799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACAG TGATGAAGTA TTTGCGCATG TTATTTGACA ATTTCACCTT GGCCTTGCTC
GGTGTAGTAC TCATCGCCAC CGTGCTGCCT TGCGCGGGCG ATGGCGCGGT GTATTTCGGC
TGGCTGACCA ACCTGGCCAT CGGCCTGTTG TTCTTCCTGC ATGGCGCCAA ACTGTCCCGT
GAAGCCATCA TTGCCGGTGC CGGGCACTGG CGCCTGCACC TACTGGTGTT CTCCTGTACT
TTCGTATTGT TCCCATTGCT GGGCCTGGCG TTCAAACCTC TGTTCGTACC GCTGGTGGGT
AACGAGCTTT ACCTGGGCAT CCTGTACCTG TGTGCCTTGC CTGCAACCGT GCAGTCGGCC
ATCGCCTTTA CCTCGCTGGC CCGCGGTAAC GTGCCGGCAG CCATCTGCAG CGCAGCGGCC
TCCAGCCTGT TAGGTATCTT CCTCACCCCG TTGCTGGTGA TGCTGCTGCT GGGGGCCGGT
GGTGATACAG GTTCCGGCCT GGATGCGGTG TTGAAGATCA CGTTGCAGCT GCTGGTGCCG
TTCGTTGCCG GGCAGGTCGC GCGGCGCTGG ATCGGCGCCT GGGTCAAGCG CAATGCGCGC
TGGCTCAAAG TGGTGGACCA GGGTTCGATC CTGCTGGTGG TGTACACCGC CTTCAGTGAG
GCCGTGGTTA CCGGGCTGTG GCACACCGTA TCGCCGCAGC ACCTGGCGGG GTTGTTCGTA
GTGTGCGCAA TTCTGCTGGC AGTGGTGCTG TTTGGCACCC GCTTGCTTGG CAAGGCGCTG
GGCTTCGACC TCGAGGATCG CATCACCATC CTGTTTGCCG GCTCCAAGAA AAGCCTGGCT
ACGGGTGTGC CCATGGCCCA GGTGTTGTTC GTGGGCAGTG GCATTGGCGC GATGATTCTG
CCGCTGATGC TTTTCCACCA GATACAGCTG ATGGTGTGTG CTGTGCTGGC GCAGCGTTAT
GCCAGCCGCG AGCAGGAGGT GGAGGTTTCG GCGTTGTCTT GA
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| Protein sequence | MDTVMKYLRM LFDNFTLALL GVVLIATVLP CAGDGAVYFG WLTNLAIGLL FFLHGAKLSR
EAIIAGAGHW RLHLLVFSCT FVLFPLLGLA FKPLFVPLVG NELYLGILYL CALPATVQSA
IAFTSLARGN VPAAICSAAA SSLLGIFLTP LLVMLLLGAG GDTGSGLDAV LKITLQLLVP
FVAGQVARRW IGAWVKRNAR WLKVVDQGSI LLVVYTAFSE AVVTGLWHTV SPQHLAGLFV
VCAILLAVVL FGTRLLGKAL GFDLEDRITI LFAGSKKSLA TGVPMAQVLF VGSGIGAMIL
PLMLFHQIQL MVCAVLAQRY ASREQEVEVS ALS
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