| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2072 |
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| Symbol | |
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| ID | 5195533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2347501 |
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| End bp | 2348853 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640586530 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001267396 |
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| Protein GI | 148547294 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCTT TGAATATGTA CACGTTGACC GAAGAGTCGA AGTTTAACCG CTTTCATGGA
ATTATTCTGT TCTGGTGCGT GTTAATTCTG ATTATCGATG GCTACGACTT GGCAGTGGTG
GGGGCTGCCT TACCGGCCAT CATGGCCGAT ATGCAAATTG ACGCAACCAG CGCCGGGGTA
ATGGCTGGCT CAGCATTGTT TGGGACAATG CTGGGCGCCA TTTTTTTAGG CACATTGGCA
GATCGAATTG GCCGGCCGAA AATGATCGCG ATCTGTGTGG CGCTGTTCAG CGTTTTCACC
GCTGCGGCAG GGTTCACTGA CAGCCCGCTG ACCTTCAGTA TCATGCGCTT TATCGCCGGC
TTGGGCATCG GCGGTGTGTT GCCCATCTGT ACGGCGCAGA TGGGTGAGTT CTCGCCCTTG
AAAGTTCGCA CCCGGCTGGT GACCATCGTT TTCGCAGGCT ATTCGGTGGG CGGAATTCTG
GTAGCCCTGA CGGGTAAACA ACTGATCGAA AGCTACGGTT GGCAATACGT GTTTTACGTG
GCCGTACTGC CAGTGGTTTT GATTCCTTTC ATTCTCAAGT CAATGCCCGA CTCTATCGGC
TTTATGTTGA AGCAGGGTCG ACAAGACGAG TTGAAAATCA TCGCGCGTCG CCTTCGTCCT
GACCTTGTGA TCACGGATGA CACGCAGCTC GTCGGCAATC CTCAGATTAT CTCTGCTCAA
GATAAGCCAG TACGAAGCCT TTTCCTGGAA GGCCGTGGAT ACAGCACGGT CATGATCTGG
ATGGCATTCA TGACTGGGCT GTTCATGGTG TATGCGCTCA ATTCGTGGCT CACCAAGTTG
ATGGCCATGG CGGGTTTCAG CCTCGGTTCA GCCCTGAATT TCGTCATCGT GTTCAACCTC
GGTTCGATCT TCGGTGCAAT TCTGGGTGGA TGGCTTAGCG ACAAATTCAG CATCAAACAC
GTCTTGGTGG TGTTCTATGT CGTGGGCGCG GTTGCACTCA CGTTGCTGGG ATATACCCGC
TCCACCGAAC TGCTCTTTGT CGTCGTGTTC ATCGTGGGTG CCTCGACCCT TGGCACCCAG
CTTCTGGCCT ATGCATACGC CGGCGATTTC TATCCCTCCA CCATCCGCTC AACTGGCGTC
GGTTTTGCCT CGGGCGTCGG TCGCGTCGGG GCGATTGTCG CGCCTGTTTT GATTGGTGCC
TTGGTGTCGA TGGCGTTGCC GCTGGAGCAG AACTTCATGG CAATTGCGCT CGCCGGCCTG
GTAGGGGCTG TTGCAGTGAC CATGATCAAC CAATCTCGCT CGGACTCGGC TGTAGTGAGG
AAGAAGGCCA CGGTTGCCCA TGAGCTGACC TGA
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| Protein sequence | MSALNMYTLT EESKFNRFHG IILFWCVLIL IIDGYDLAVV GAALPAIMAD MQIDATSAGV
MAGSALFGTM LGAIFLGTLA DRIGRPKMIA ICVALFSVFT AAAGFTDSPL TFSIMRFIAG
LGIGGVLPIC TAQMGEFSPL KVRTRLVTIV FAGYSVGGIL VALTGKQLIE SYGWQYVFYV
AVLPVVLIPF ILKSMPDSIG FMLKQGRQDE LKIIARRLRP DLVITDDTQL VGNPQIISAQ
DKPVRSLFLE GRGYSTVMIW MAFMTGLFMV YALNSWLTKL MAMAGFSLGS ALNFVIVFNL
GSIFGAILGG WLSDKFSIKH VLVVFYVVGA VALTLLGYTR STELLFVVVF IVGASTLGTQ
LLAYAYAGDF YPSTIRSTGV GFASGVGRVG AIVAPVLIGA LVSMALPLEQ NFMAIALAGL
VGAVAVTMIN QSRSDSAVVR KKATVAHELT
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