| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2061 |
|---|
| Symbol | |
|---|
| ID | 5195062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 2332387 |
|---|
| End bp | 2334642 |
|---|
| Gene Length | 2256 bp |
|---|
| Protein Length | 751 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640586519 |
|---|
| Product | catalase/peroxidase HPI |
|---|
| Protein accession | YP_001267385 |
|---|
| Protein GI | 148547283 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0376] Catalase (peroxidase I) |
|---|
| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAACG AATCGAAATG CCCGTTCCAT CAAACCGCAG GTGGCGGCAC CACCAACCGT
GACTGGTGGC CTGACCAGCT CAACCTGAGA ATTCTTCACC AGCATTCCTC CAAGTCCAGC
CCCGACCCGG ACTTCGACTA TGCCAAGGCG TTCAAGAGCC TCGACTTCCA GGCCCTGAAG
AAAGACCTGA CTGCCCTGAT GACCGACTCG CAGGATTGGT GGCCGGCCGA CTTTGGCCAT
TACGGCCCGC TGTTCATCCG CATGGCCTGG CACAGCGCGG GCACCTACCG CATTGGTGAT
GGCCGCGGTG GTGCGGGCTC TGGCCAGCAA CGCTTCGCTC CGCTCAACAG CTGGCCGGAC
AACGTCAGCC TGGACAAGGC CCGGCGCCTG CTGTGGCCGA TCAAGCAGAA GTACGGCAAC
AAGATTTCCT GGGCCGACCT GATCGTACTC ACCGGTAATG TTGCCCTCGA GTCCATGGGC
TTCAAGACCT TCGGCTTCTC CGGCGGGCGT GCCGATGTGT GGGAGCCGGA CGAAGACGTG
TACTGGGGGT CGGAAAAGGT CTGGCTGGGC GGCGATACCC GTTACGGCAA GGATCAGGTC
AAGGCGCAGC CGCCGGGGCA GGGTGACCTG GTGGCCGAGC CGGCCAAGCA TGGTGAAGAG
CAGAATCGCG ACCTGTCGGC CGAACGTAAC CTGGAAAACC CGCTGGCCGC CGTGCAGATG
GGCCTGATCT ACGTGAACCC GGAAGGCCCG GAAGGTAACC CCGACCCCGT GGCTTCGGGC
AAGGACATCC GTGAAACCTT TGGCCGCATG GCCATGAACG ATGAAGAAAC CGTGGCCTTG
ATCGCCGGTG GCCACGCGTT CGGTAAGACC CATGGTGCCG GCCCCGCCGA CAACGTCGGC
CCCGAGCCGG AAGCGGCAGG CCTGGAAATG CAGGGCCTGG GCTGGCACAA CACGTTTGGC
TCCGGCAAAG GCGGGGATAC CATCACCAGT GGCCTGGAAG TGACCTGGAC CTCCACCCCG
ACCCGATGGA GCAACGAATA CCTGAATAAC CTGTTCGACT TTGAGTGGGA GCTGACCAAA
AGCCCGGCCG GCGCGCACCA GTGGCGGCCA AAAGAGGGCA AAGGCGCCGG AACGGTGCCC
GATGCACACG ATCCCGGTAA AAAGCACGCA CCGTCGATGT TGACCTCCGA CCTGGCATTG
CGCTTCGATC CGATCTACGC GCCGATCGCC CGCCGTTTCA AAGACAACCC TGAGCAACTG
GCGGATGCTT TTGCCCGTGC ATGGTACAAG CTGATCCACC GCGACATGGG CCCGCTGGCG
CGCTATCTGG GCCCGGAAAT GCCCAATGAA GAGTTGCTGT GGCAAGACCC GTTGCCCAAA
GCTGACCCAT CCACGATCAG CGAGCAAGAC ATCGCGACCC TCAAGTCCAG GATCCTGGCC
TCGGGTTTGA GCGTGGGCGA ACTGGTCTCC ACCGCCTGGG CATCCGCGTC GACCTTCCGC
GGCTCCGACA AGCGCGGTGG TGCCAACGGC GCACGTTTGC GCTTGGCGCC ACAGAAGGAC
TGGGCTGCAA ACCAGGGCGT GGACAAGGTG CTGGCGGCAT TGGAGAAGAT CCGGGGCGAG
TTCAACAACG GCGGCAAAAA GGTTTCCCTG GCCGACCTGA TCGTGCTGGC TGGTACCGCG
GCAGTCGAAA AAGCTGCCAA GGATGCGGGT TACAGCGGCA GCGTAGGGTT CCGCCCAGGC
CGAGTCGATG CGTCCCAGGA GCAGACCGAC GTCGAGTCGT TCGCCGTGCT GGAACCGCTG
GCCGACGGCT TCCGCAACTT CACCAAGGCA CGCTACAGCG TCAAGGCCGA GAAACTGTTG
CTGGACAAGG CGCAGTTGCT GACCCTGACC GCGCCGGAGC TGACCGTGCT GATCGGTGGC
CTGCGGGTGC TCGGTGCCAA CCATGGTGGC AGCAACCTCG GCGTGTTCAC CGACAAGCCG
GGGACGCTGA GCAACGACTT CTTCCGCAAC TTGCTGGATA TGAGCGTGGA GTGGAAACCG
ACCTCGGCGG ACAACGAAAC CTTCGAAGGC CGCGACCGCA AGACCGGGCA GGTGAAGTGG
AGCGGTAGCC GGGTCGATCT GGTGTTCGGT TCGCATGCCC AGTTGCGGGC GTTGAGCGAG
GTGTATGGCA GCAGTGATGG GGGTGACAAG TTTGTCCGCG ACTTTGTGGC CGCCTGGCAG
AAGGTCATGG AGCTTGACCG CTTTGATTTG AAATAG
|
|---|
| Protein sequence | MSNESKCPFH QTAGGGTTNR DWWPDQLNLR ILHQHSSKSS PDPDFDYAKA FKSLDFQALK
KDLTALMTDS QDWWPADFGH YGPLFIRMAW HSAGTYRIGD GRGGAGSGQQ RFAPLNSWPD
NVSLDKARRL LWPIKQKYGN KISWADLIVL TGNVALESMG FKTFGFSGGR ADVWEPDEDV
YWGSEKVWLG GDTRYGKDQV KAQPPGQGDL VAEPAKHGEE QNRDLSAERN LENPLAAVQM
GLIYVNPEGP EGNPDPVASG KDIRETFGRM AMNDEETVAL IAGGHAFGKT HGAGPADNVG
PEPEAAGLEM QGLGWHNTFG SGKGGDTITS GLEVTWTSTP TRWSNEYLNN LFDFEWELTK
SPAGAHQWRP KEGKGAGTVP DAHDPGKKHA PSMLTSDLAL RFDPIYAPIA RRFKDNPEQL
ADAFARAWYK LIHRDMGPLA RYLGPEMPNE ELLWQDPLPK ADPSTISEQD IATLKSRILA
SGLSVGELVS TAWASASTFR GSDKRGGANG ARLRLAPQKD WAANQGVDKV LAALEKIRGE
FNNGGKKVSL ADLIVLAGTA AVEKAAKDAG YSGSVGFRPG RVDASQEQTD VESFAVLEPL
ADGFRNFTKA RYSVKAEKLL LDKAQLLTLT APELTVLIGG LRVLGANHGG SNLGVFTDKP
GTLSNDFFRN LLDMSVEWKP TSADNETFEG RDRKTGQVKW SGSRVDLVFG SHAQLRALSE
VYGSSDGGDK FVRDFVAAWQ KVMELDRFDL K
|
|---|
| |