| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1999 |
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| Symbol | |
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| ID | 5195183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2259992 |
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| End bp | 2261281 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640586457 |
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| Product | outer membrane porin |
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| Protein accession | YP_001267323 |
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| Protein GI | 148547221 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00175202 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTTCCC CTTTTCCCCT CGCCCCCGGG CGCCGTGTAA CCGGCCTGTT TCTATTGTGT
GCCGGTGTCA ACGCCCAGGC TGCTGGGTTT CTTGAAGACG GCAGTGCCAA GATCGAAGCA
CGCAATGTCT ATTTCAACCG GGACTTCCGG GACGGTTACA GCAGTTCCAG CCAGGGCGCA
TCCAAGCGCG AAGAGTGGGC ACAAGGCTTC ATCCTCAATG TGCAATCGGG TTATACGCAA
GGCCCGGTAG GTGTTGGTGT GGATGCGCTG GGCATGTTCG GCTTCAAACT GGACTCCAGC
CCGGCCGACA GTAACAGTGG ATTGCTGCCC TCGTCTGGCC ACGACCCCCG GCACTCGGCC
GACCAGTATG CGAAGATGGG CCTGGCGGCC AAGGTCAAGG TCTCCAATAC CGTGCTCAAG
TACGGCTCAA TGATGCCGGA TGTGCCGTTG CTCAAGTACA ACGATGGCCG TCTGCTGCCG
ACCCTGTTCC AGGGTGCCAT GCTCACCTCT GAAGAACTGC ACGACCTGAA GTTCACCCTG
GCTCGCCTGG ACAACTACAC CGCTCGGGAT TCCACCGATC GCCAGGACAT CCGCGTGCAC
TGCAAGAACA AGCGTTATGC CTGCGATACC GAAGCCGACC ACTTCGACCT GGCCGGTGTC
GACTACCGTT TCAACGAGCG TTTCAGCGCC CAGTACCAAG TGGCCAAACT GGAGAATATC
TACCGTCAGC ACTTCCTCGG CCTGGTGGCC AGTCAGCCGC TGCCGGTGGG CAGCCTGTCG
GCTGACATGC GCCTGATCAA GAGTGATGAC ATCGGCAATG CCCGTGCCGG TGAAATCGAC
CATCGCGCCT TCAGCGGCAT GCTTGGCTAC AGCCTTGGTG GCCACAAGCT CAGCGCCGGC
TGGCAGCGCA TGTATGGCAA CAGCGCCATG CCGTATCTGG ATGGTAGCAA CCCGTACCTG
GTCAACTACG CCCAGGTCAA TGATTTCGCC GCTGCACAGG AGCGCTCCTG GCAAGTGCGC
TATGACTACG ACTTCAAGGC GTTGGGTGTG CCCGGCCTGA CCTTCTTCAC CCGTTATATC
AACGGCGACA ATATCAAGGT GCCGGGCAGC CGTGCCGAAG GCAAGGAGTG GGAACGCGAC
ACCGAGTTCA AATACCAGGT GCAAAGTGGC TCTTTCAAGG ATGTCAGCGT ACGCCTGCGT
AATTCCACTT ACCGCAGCAA CTATGAACAG TGGGCGCGTG ACATGGATGA GACGCGGGTC
ATTGTCAGCT ACAACTTCTC GATCTTCTAA
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| Protein sequence | MFSPFPLAPG RRVTGLFLLC AGVNAQAAGF LEDGSAKIEA RNVYFNRDFR DGYSSSSQGA
SKREEWAQGF ILNVQSGYTQ GPVGVGVDAL GMFGFKLDSS PADSNSGLLP SSGHDPRHSA
DQYAKMGLAA KVKVSNTVLK YGSMMPDVPL LKYNDGRLLP TLFQGAMLTS EELHDLKFTL
ARLDNYTARD STDRQDIRVH CKNKRYACDT EADHFDLAGV DYRFNERFSA QYQVAKLENI
YRQHFLGLVA SQPLPVGSLS ADMRLIKSDD IGNARAGEID HRAFSGMLGY SLGGHKLSAG
WQRMYGNSAM PYLDGSNPYL VNYAQVNDFA AAQERSWQVR YDYDFKALGV PGLTFFTRYI
NGDNIKVPGS RAEGKEWERD TEFKYQVQSG SFKDVSVRLR NSTYRSNYEQ WARDMDETRV
IVSYNFSIF
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