Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1838 |
Symbol | |
ID | 5194375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2110016 |
End bp | 2110312 |
Gene Length | 297 bp |
Protein Length | 98 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640586306 |
Product | DsrH family protein |
Protein accession | YP_001267175 |
Protein GI | 148547073 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2168] Uncharacterized conserved protein involved in oxidation of intracellular sulfur |
TIGRFAM ID | [TIGR03011] sulfur relay protein TusB/DsrH |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000194131 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAGACCC TGCATGTAAT TGCCCATTCC CCGTTTGGCG ACGAGCGCCT GGCCAGTTGC CTGCGCCTGC TCGGTGCCGA AGATGCCCTG CTGCTGTGCG GCGATGCCGT GTATGCCCTG CGCAGCGGCA GCGAGCCGCA TGGCCATCTG CAAGCCGCCG GCCTGGCCCA GCGCCTGTTC GCCCTGGACG AGGATGTACA GGCCCGCGCG GTCGGCAACG ACCTGGCAAA GGCCGTGGAC TACGCCGGGT TCGTCGAACT GTCGCTGCAA TACGACAAGG TCAACAGCTG GCTATGA
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Protein sequence | MKTLHVIAHS PFGDERLASC LRLLGAEDAL LLCGDAVYAL RSGSEPHGHL QAAGLAQRLF ALDEDVQARA VGNDLAKAVD YAGFVELSLQ YDKVNSWL
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