Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1231 |
Symbol | |
ID | 5195244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1395280 |
End bp | 1397922 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640585694 |
Product | hypothetical protein |
Protein accession | YP_001266576 |
Protein GI | 148546474 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0755535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCGC ACAATCCCGA ACCTCCGGTG CCACTCGCTA CGGCGCTACC CGGTGCTGTG CAGCGCCTGC CCCTACTCGA ACGCCTGAGT CGCTACCGCC AGCCCATAGG CCTGATGGTG ACCCTGTTAC TGTTCACGAT GGCCTTGATT GCCTGCCGCC ACCTGCTGAG CGAACTGGAC ATCTATGCCT TGCACGATGC CATGCTCAGC GTGCCCACCC AGTCATTGCT GGGCGCCTTG CTGGCAACGG TGATCGGCTT TGTGATCCTG CTGGGCTACG AGTGGTCGGC CAGCCGCTAT GCGGGCGTGA AACTGCCAGC ACGCAGCCTG GCACTGGGCG GCTTCAGCGC CTTTGCCATC GGCAACGCCA TCGGCCTGTC GATGCTCTCT GGCGGCTCGG TTCGCTATCG CCTGTACGCA CGGCAAGGGC TTGGTGCTGG CGAAGTCGCA CGCATGACCG TGTTTGCCAG CCTGTCACTG GGCTGCGCGC TGCCGCCCCT GGCCGCCTTG GCGACATTGA GCAACCTGCC GGCGGCCTCG ACAGCGCTCG GGTTGGCGCC CGGCCTGCTG GCAGCTGTTG CCAGCGCCGT GCTGGTGGTG TCTGCCTTAC TGGTAATTGG CTTGTACCGC CGACGCCTGG CCGAGCAACC GGCGGCCAAT AACCTGCTCG TTCAACTGGG GCGGCGCACA CTTCGCCTGC CGGATGCACG CCTGGCGGCC CTGCAATTGC TGATAACCGC GCTGGATGTG GCGGCGGCGG CCACCGTGCT CTACCTGTTG CTGCCCGAAG CCCCTCCTTT CGGCGCGTTC GTGCTGGTGT ACCTGCTGGC CTTGGCCGCG GGCGTGCTCA GCCACGTACC GGGCGGCGTC GGGGTGTTCG AAGCGATCCT GCTGGCGGCC TTTGCCGACC AGCTCGGTGC CGCACCGCTG GCGGCTGCCT TGCTGCTGTA CCGGCTGATC TATGTGGTGC TGCCACTGCT GCTGGCCTGC GTGTTGCTGC TGGCCAATGA AGCCCGACGC CTGCTGTTTG CGCAACAGGC CATCAAGGCC GCTTCAGGTC TGGCCGCACC GATCCTGTCG ATTCTGGTGT TCCTGTCCGG CGTGGTGCTG CTTTTTTCCG GTGCCACGCC CGAGATAGAT ACGCGCCTGG AGCATATGGG TTTCCTGGTG CCACACCGGC TGATCGACGC CTCTCATTTC GGCGCCAGCC TGATCGGTGT GCTATGCCTG CTGCTGGCCC AAGGCCTGCG CCGGCGCCTG TCCGCCGCCT GGCTACTGAC CACCGTGCTG TTGCTGGTCG GCGCCCTGCT GTCGCTGTTG AAGGGCTTTG ACTGGGAAGA GGCTTGCCTG CTGACCTTTA CCGCCGCCCT GCTCGCGCTG TTCCGCCGCT CGTTCTATCG CCCCAGCCGA CTGCTGGAGC TGCCCTTCTC GCCGGTTTTC CTGGTGGCCA GCGCCTGTAC GGTGGGCGCA TCAGTGTGGC TTCTGCTGTT CGCCTACCAG GATGTGCCTT ACAGCCATCA GCTGTGGTGG CAGTTCACCC TCGATGCCGA CGCGCCACGG GGCCTGCGCG CCGCCATGGG CAGTGCCTTG CTGCTGGCTG CCGTGGCACT GACGTGGCTG CTGCGCACAG CGCCGCCAGT GATCCACCTG CCCGATGAAG AAGAGCTGCA ACGCGCCAGC CGCATCCTGC AGGCCTCCGA CCAGCCCGAC GGCGGCTTGG CGCTGACTGG CGACAAGGCG TTGCTGTTCC ACCCGCGTGG TAACGCGTTC CTCATGTACG CCCGGCGCGG CCGCAGCCTG GTGGCGCTGT ACGACCCGAT AGGCCCGGCC CAGGAACGCG CCGAGATGAT CTGGCAGTTC CGCGACCTGT GCGACCTGCA CCACGCACGC CCCGTGTTCT ACCAGGTACG CGCGGAGAAC CTGCCGTTCT ACATGGACAT CGGCCTGACC GCATTGAAGC TCGGTGAAGA AGCCCGGGTC GACTTGCGCC GCTTTGACCT TGAAGCCAAA GGCAAGGAGA TGAAAGACCT GCGCTACACC TGGAACCGCG GCGGACGCGA TGGCCTGAGC CTGGAGATCC ATGAGCCCGG CCACGCCCCG TTGGCTGAGC TGAATGAAAT TTCCGACGCC TGGCTCGGCG GTAAAAACGT GCGCGAGAAA GGCTTCTCGC TGGGGCGCTT CAGCCCAGAC TACCTGCAGC ACTTCCGCAT AGCCCTGATT CGCTTCCAGG GCCGCCCGGT AGCCTTCGCC AACTTGCTGG AAACCCATGG AAACGAGCTG GCCAGCCTCG ACCTGATGCG TGCGCACCCC GAAGCGCCAA AGCTGACCAT GGAGTTCATG ATGATCGGCT TGATCCTGCA CTACAAAAGC CATGACTACG GGCGTTTCAG CCTGGGCATG GTACCGCTGT CCGGCCTGCA ACCCAGGCGC GGCGCCCCCT TGACCCAGCG CTTGGGTTCG CTGGTGTTCC GCCGTGGTGA ACAGCTTTAC AACTTCCAGG GGCTTCGACG CTTCAAGGAC AAGTTCCAGC CGGACTGGGA ACCCCGCTAC ATGGCCGTGC CAGCCGGGCT CGACCCGCTG GTGGCACTGG CCGACACCGC CGCTCTGATT GCAGGCGGCC TGACTGGATT GGTGAAACGC TGA
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Protein sequence | MTSHNPEPPV PLATALPGAV QRLPLLERLS RYRQPIGLMV TLLLFTMALI ACRHLLSELD IYALHDAMLS VPTQSLLGAL LATVIGFVIL LGYEWSASRY AGVKLPARSL ALGGFSAFAI GNAIGLSMLS GGSVRYRLYA RQGLGAGEVA RMTVFASLSL GCALPPLAAL ATLSNLPAAS TALGLAPGLL AAVASAVLVV SALLVIGLYR RRLAEQPAAN NLLVQLGRRT LRLPDARLAA LQLLITALDV AAAATVLYLL LPEAPPFGAF VLVYLLALAA GVLSHVPGGV GVFEAILLAA FADQLGAAPL AAALLLYRLI YVVLPLLLAC VLLLANEARR LLFAQQAIKA ASGLAAPILS ILVFLSGVVL LFSGATPEID TRLEHMGFLV PHRLIDASHF GASLIGVLCL LLAQGLRRRL SAAWLLTTVL LLVGALLSLL KGFDWEEACL LTFTAALLAL FRRSFYRPSR LLELPFSPVF LVASACTVGA SVWLLLFAYQ DVPYSHQLWW QFTLDADAPR GLRAAMGSAL LLAAVALTWL LRTAPPVIHL PDEEELQRAS RILQASDQPD GGLALTGDKA LLFHPRGNAF LMYARRGRSL VALYDPIGPA QERAEMIWQF RDLCDLHHAR PVFYQVRAEN LPFYMDIGLT ALKLGEEARV DLRRFDLEAK GKEMKDLRYT WNRGGRDGLS LEIHEPGHAP LAELNEISDA WLGGKNVREK GFSLGRFSPD YLQHFRIALI RFQGRPVAFA NLLETHGNEL ASLDLMRAHP EAPKLTMEFM MIGLILHYKS HDYGRFSLGM VPLSGLQPRR GAPLTQRLGS LVFRRGEQLY NFQGLRRFKD KFQPDWEPRY MAVPAGLDPL VALADTAALI AGGLTGLVKR
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