| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0946 |
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| Symbol | |
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| ID | 5190186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1072970 |
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| End bp | 1074118 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585404 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001266291 |
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| Protein GI | 148546189 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCC GCCGCATGCT CATCATGTTG GCCGTGGTTC TGCTGATCGT GCTGGCCCTG
GGGGGTTACA AAGCCTTCTC GATCTACCAG CAGATCCAGA TGTTCACTGC CCCCAAGCCC
CCTATCACCG TGGCGGCTGC CATGGCTGAA CAGCGCCCGT GGCAAGAGCG CCTGCCCGCT
GTCGGCAGCC TCAAAGCGCT GCAGGGCGTG GATCTGAGCC TGGAGGTGGA AGGCATCGTC
AAATCCCTGC ACTTCGACTC AGGCCAGCAG GTCAAGGCCG GGCAACTGCT CTTGCAGCTC
AACGACGATC AGGAAACAGC CCTGCTCGGT ACCGCCCTGG CCGACCTGGG CCTGGCCAAG
GTCGACTTCG GCCGTGGCAG CCAGCTGGTG GGCGATTCGG CCATCTCCCG CGGCGAGTTC
GACCGCCTTT CCTCCCAGTA CCGGCGCAAC CAGGCAGTGG TCGAGCAGCT TAAGGCGCAG
AAGATCAAGA AACGCATCAA TGCACCTTTC AGCGGCACCA TCGGCATCCG CCAGGTGGAC
ATCGGCCAGT ACCTGGCCGC CGGCACTGTG ATCGCCACCC TGCAAGACAC GTCCAGCCTG
TACGTAGACT TCAATGTGCC GGAACAGGCG CTGCCACACC TGAGCCTGGG CCAGCAGGTG
CTGGTGCAAG TGGCCGCCTA CCCGGGTCAG CGCTTCCCCG GCAGCCTCAG CGCCATCAAC
CCCAAGGTCG AGGAAACCAC GCGCAACCTG CTGGTACGCG CCACCCTGGC CAACCCCGAC
GGCAAACTGC TGCCAGGCAT GTTCGCCAGC CTGTTGATCC TGCTGCCCAA CCCGCAACCG
CAAGTGGTGG TGCCGGAAAG CGCCATTACC TACACCCTGT ATGGCAACTC GGTGTATGTC
GCCTCACCGA AAAAGGACAA GGACGGCAAG CCGGAATACG ACGACAAGGG CCAACCCCAG
CTGGTCGCCG AACAGCGCAC GGTAAAAACT GGCGAGCGCC GAGACGGCGT GGTTGTAGTC
AGCGAAGGCC TGCAGGCCGG GGAACAGGTG GTCACCGCCG GGCAGCTGAA ACTCACACCC
GGTGCCGCGA TACGCATTGG CCAGGACAAC GCCCTCAAGC CCGAACCGGG CGCAGCGGCC
AAGGACTGA
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| Protein sequence | MLRRRMLIML AVVLLIVLAL GGYKAFSIYQ QIQMFTAPKP PITVAAAMAE QRPWQERLPA
VGSLKALQGV DLSLEVEGIV KSLHFDSGQQ VKAGQLLLQL NDDQETALLG TALADLGLAK
VDFGRGSQLV GDSAISRGEF DRLSSQYRRN QAVVEQLKAQ KIKKRINAPF SGTIGIRQVD
IGQYLAAGTV IATLQDTSSL YVDFNVPEQA LPHLSLGQQV LVQVAAYPGQ RFPGSLSAIN
PKVEETTRNL LVRATLANPD GKLLPGMFAS LLILLPNPQP QVVVPESAIT YTLYGNSVYV
ASPKKDKDGK PEYDDKGQPQ LVAEQRTVKT GERRDGVVVV SEGLQAGEQV VTAGQLKLTP
GAAIRIGQDN ALKPEPGAAA KD
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