Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4570 |
Symbol | |
ID | 6113551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 5047051 |
End bp | 5047635 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641624376 |
Product | hypothetical protein |
Protein accession | YP_001751419 |
Protein GI | 170723731 |
COG category | [S] Function unknown |
COG ID | [COG1739] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00257] uncharacterized protein, YigZ family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000582787 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0106541 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCTA CCCTGCTCGA CCTCTGCGAG TTTCGCGAGG AAATCCGCAA AAGCCGCTTC ATTACCCTCG CCGGCCCGAT ATCCAGCGCC GCCGAGGCGA TGAGTTTCAT CGAACGCCAT AGCGACTTGG CTGCCACGCA CAATTGCTGG GCCTGGAAGC TGGGCGGGCA ATACCGCAGC AGCGATGATG GCGAACCTGG CGGCACGGCC GGCAGGCCAA TCCTGGCTGC CATAGAAGCC CAGGATTGTG ACCAGGTCGT GGTGTTGGTG ATCCGCTGGT ACGGGGGCAT CCAGCTAGGC ACGGGCGGCC TGGCCCGGGC TTATGGTGGC GGTGCCAACA AGTGCCTGCA GCAGGCGCCG AAAAGGCTGC TGGTGCAACG CAGCGAGTAC AGCTGCAGCT GCAGCTTCAG CGAACTGGCC CTGGTCAAAC TGCGCCTGGC CGAAGTCGAC GCTTTGGTGC TGGAAGAACG GTTCACCGCC AACGGGGTGG ATCTGCACAT TGCGGTAGGT GAAGAACACA TCGGCGCGCT GCAACAGCAA CTGGCCGACC TCAGCCGCGG GCGCATCCTC TTGGAAGCCC ACTGA
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Protein sequence | MPSTLLDLCE FREEIRKSRF ITLAGPISSA AEAMSFIERH SDLAATHNCW AWKLGGQYRS SDDGEPGGTA GRPILAAIEA QDCDQVVVLV IRWYGGIQLG TGGLARAYGG GANKCLQQAP KRLLVQRSEY SCSCSFSELA LVKLRLAEVD ALVLEERFTA NGVDLHIAVG EEHIGALQQQ LADLSRGRIL LEAH
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