| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4082 |
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| Symbol | rpsB |
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| ID | 6113051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4506118 |
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| End bp | 4506855 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641623876 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_001750931 |
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| Protein GI | 170723243 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.610461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCAAG TCAACATGCG CGATATGCTG AAGGCCGGTG TGCACTTCGG CCACCAGACC
CGTTACTGGA ACCCGAAAAT GGGCAAGTAC ATTTTCGGCG CGCGTAACAA GATCCACATC
ATCAACCTGG AAAAAACCCT GCCAATGTTC AACGACGCTC TGTCGTTCGT AGAACGCCTG
GCCCAGGGCA AGAATAAGAT CATGTTCGTC GGCACCAAGC GTTCCGCCGG CAAGATCGTC
GCCGAGCAAG CTGCTCGTTG CGGTTCGCCA TACGTTGACC ACCGCTGGTT GGGCGGCATG
CTGACCAACT ACAAAACCAT CCGCGCTTCG ATCAAGCGTC TGCGCGACCT GGAAACCCAG
GCCGAAGACG GCACTTTTGC CAAGCTGACC AAGAAAGAAG CCCTGATGCG TTCGCGCGAT
CTGGAAAAGC TGGACCGCAG CCTGGGTGGT ATCAAGGACA TGGGCGGCCT GCCTGATGCC
CTGTTCGTGA TCGACGTTGA CCACGAGCGC ATTGCCATCA CCGAAGCCAA CAAGCTGGGC
ATCCCGGTTA TCGGCGTTGT CGATACCAAC AGCAGCCCAG AAGGTGTTGA CTACATCATC
CCAGGTAACG ATGACGCCAT TCGCGCTATC GAGCTGTACA TGACTTCGAT GGCTGACGCC
GTCATCCGCG GCCGCAACAA CGTTGCTGGC GGCACCGAAG TCTACGCTGA AGAAGCGGCT
GCACCTGCTG CCGAGTAA
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| Protein sequence | MSQVNMRDML KAGVHFGHQT RYWNPKMGKY IFGARNKIHI INLEKTLPMF NDALSFVERL
AQGKNKIMFV GTKRSAGKIV AEQAARCGSP YVDHRWLGGM LTNYKTIRAS IKRLRDLETQ
AEDGTFAKLT KKEALMRSRD LEKLDRSLGG IKDMGGLPDA LFVIDVDHER IAITEANKLG
IPVIGVVDTN SSPEGVDYII PGNDDAIRAI ELYMTSMADA VIRGRNNVAG GTEVYAEEAA
APAAE
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