| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1338 |
|---|
| Symbol | |
|---|
| ID | 6110266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 1461560 |
|---|
| End bp | 1462306 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641621112 |
|---|
| Product | HK97 family phage prohead protease |
|---|
| Protein accession | YP_001748212 |
|---|
| Protein GI | 170720524 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3740] Phage head maturation protease |
|---|
| TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.155288 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCTG CACCCAGCAG CTGGTGGTCT GCGCCCGGTA CCAAGGCAGA TCACAAGGAC
CGAGCAGCGG CGGTCAAGTA CCGCTCTTTC GACTATGACG TGAAGGCTGT CGGCGACGAC
GGCCGGTTTT CTGGCTACGG CTCGGTGTTC GGCGTGGTCG ACAGCTACAA GGAAGTGGTT
GCTCCTGGCG CATTTCTCGA ATCGATCGAA GATACCAAGG CCAAGGGCCG TACCTTTCCT
GTGCTCTGGC AGCACATGAC CCGAGAGCCG ATTGGCAGTT GGGATATTGA AAGCCTGAAA
GAAGACGATC ACGGCTTGTT TGGCGACGGC GAACTGTGGC TGCCGGATGC CCCATACGCT
CGAATCGCTT ACCGCGGCAT GCAAACCCGC TCGATCACCG GTTTGTCCAT CGGTTACTAC
ATCCGAGAAT CGAGCTTCGA CCAAAAGACC GGTATCCGAA CCTTGACGAA GCTCGACTTG
ATCGAGATCT CGATCGTCAC CGTGCCGGCC AACGACGATG CGCGTACCGA CACCATCAAA
TCGAAGCTGG CCCACGGCGG CCTGCCTTCG ATGCCCGAAT TTGAGTTGCT CCTGCGCGAG
GCAGGCTTCT CGAAAACTCA GTCCGCGGTG ATTGCCAACC GTGGCCTGCA GCACCTGCTC
CGGAGCGAGT CCGAGGGCGA CCTGGCAGCA ATCGAAATCG TCGAGGCGTT GAAGTCGCGC
CCGGCACTTT CTCTCCCATC GTTTTGA
|
|---|
| Protein sequence | MTSAPSSWWS APGTKADHKD RAAAVKYRSF DYDVKAVGDD GRFSGYGSVF GVVDSYKEVV
APGAFLESIE DTKAKGRTFP VLWQHMTREP IGSWDIESLK EDDHGLFGDG ELWLPDAPYA
RIAYRGMQTR SITGLSIGYY IRESSFDQKT GIRTLTKLDL IEISIVTVPA NDDARTDTIK
SKLAHGGLPS MPEFELLLRE AGFSKTQSAV IANRGLQHLL RSESEGDLAA IEIVEALKSR
PALSLPSF
|
|---|
| |