Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0922 |
Symbol | rplM |
ID | 6109839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1018530 |
End bp | 1018958 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641620686 |
Product | 50S ribosomal protein L13 |
Protein accession | YP_001747796 |
Protein GI | 170720108 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0102] Ribosomal protein L13 |
TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTT TTACTGCTAA ACCGGAAACA GTAAAGCGCG AGTGGTTCGT AGTCGACGCC GCTGGCCAGA CCCTGGGTCG TCTGGCTACC GAAATCGCTA GCCGTCTGCG TGGCAAGCAC AAACCAGAAT ACACCCCTCA CGTTGACACC GGCGACTACA TCGTCGTCAT CAACGCCGAG CAAATCCGTG TAACTGGCGC CAAGTCTTCC GACAAGATGT ACTACTCCCA CTCCGGCTTC CCGGGCGGTA TCAAGGAAAT CAACTTCGAG AAGTTGATCG CCAAGGCCCC TGAGCGTGTT ATCGAAACCG CGGTCAAAGG CATGCTGCCG AAGAACCCGC TGGGTCGCGA CATGTACCGT AAGCTGAAAG TGTACGCGGG TGCTGCTCAC CCACACACTG CTCAGCAGCC TCAAGAACTG AAGATCTAA
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Protein sequence | MKTFTAKPET VKREWFVVDA AGQTLGRLAT EIASRLRGKH KPEYTPHVDT GDYIVVINAE QIRVTGAKSS DKMYYSHSGF PGGIKEINFE KLIAKAPERV IETAVKGMLP KNPLGRDMYR KLKVYAGAAH PHTAQQPQEL KI
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