Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0063 |
Symbol | |
ID | 6109233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 69085 |
End bp | 70428 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641619819 |
Product | outer membrane porin |
Protein accession | YP_001746938 |
Protein GI | 170719250 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000166078 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATCA AAGTACCACT GTATTTGGCG GCAGTTTCTG CGCTGTCTGG AAGCTATGCT ATTTCGGCAC AGGCAGAAGA CAAGCCAGAA GGCTTCATTG AAGGCAGCAG CCTTACAGTG CTGAACCGTA ACTTCTACTT CAACCGTGAT AACCGCGACA GCACTGCCCC CACTTATAAC AGTGGCAAGG GCAACACCAA CGGCTACTCC GAAGCCTGGG CGCACGCGAT CATCAGCAAA TTCAACTCTG GGTTTACCCA GGGAACCGTT GGCTTTGGCG TTGATGCCTT CGCCATGATC GGCCTCAAGC TCGACACCGG TGATGGGCGC AACGGCGGCC GTAGCTCCTT CGACGTGCTA CCCGTTGATA ACAAGGGCGA AGCTCGCGAC GAATACACCA AGGTCGGCGG CGCAGCCAAA GTCCGCTTGT TCGATACCAT CGTGAAAGTA GGTGATGTTT TCCCATCGAC TCCGGTCGTT GCATCCGGCG ACTCTCGCCT GCTGCCAGAA AGCTTCCGCG GCGTGACCGT TGAGAACACC AGCATCCAAG GCCTCACCCT GCAGGGTGGT CGTCTGCATG CGATGAGCCA GCCGGTCTCA AGCAACCTGA ACGACAACTT CGTGACGTTC TACGGCGGCC CGGTCAACTC GCCATGGATC GGTTACGGTG GCGGTGACTA CTCGATCAAC GACAACTGGA CTGTGAGCGT CTACGCCAGC CAGCTGAAAG ACGTCTGGAA TCAGTACTAC GCCGGCACCA GCGTGGTTTA CCCGCTGAGC GACGATCTGG CGCTGATCGG TGGCTTCAAC TACTACAAAG CCGTAGATGA AGGTAAGAAG CGCCTGGGTG AATTCGACAA CAACATCTGG AGTGCCAAGG TCGGCGTGCG TTACGGTGCC CATACCCTAG CCCTGTCGCA CCAGCGCAAC AACGGCGACG ACGATTTTGA CTACCTGCGT CAGTCGGACT CGATTTTCGT CGACAACTCC ATCCAGTACA GCGACTTCAA CTCGCCGAAA GAGCGTTCCT GGATGCTGCG CTATGACCTG AACTTCACCA GCTACGGCAT TCCAGGCCTG ACGTTCATGA CCCGCTACGC CAGAGGCTCG GGCGCGGATT ACTCGAACGC TAACCAGTTC TACATGCGCA CTGATGACAA CGGCAACCCG CTCGACAATC AGAAGCGTTG GGAGCGTGAC GTCGAAGTCA AATACGTTGT CCAAACCGGT CCAGCAAAAG ATCTGTCCTT CCGGTTGCGC CAGGCAACCA CACGTGCCAC TGCATTCGAA TCGGATCTGG ATGAAACCCG TGTGATCATT GAGTACCCGC TTTCGATTCT GTAA
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Protein sequence | MKIKVPLYLA AVSALSGSYA ISAQAEDKPE GFIEGSSLTV LNRNFYFNRD NRDSTAPTYN SGKGNTNGYS EAWAHAIISK FNSGFTQGTV GFGVDAFAMI GLKLDTGDGR NGGRSSFDVL PVDNKGEARD EYTKVGGAAK VRLFDTIVKV GDVFPSTPVV ASGDSRLLPE SFRGVTVENT SIQGLTLQGG RLHAMSQPVS SNLNDNFVTF YGGPVNSPWI GYGGGDYSIN DNWTVSVYAS QLKDVWNQYY AGTSVVYPLS DDLALIGGFN YYKAVDEGKK RLGEFDNNIW SAKVGVRYGA HTLALSHQRN NGDDDFDYLR QSDSIFVDNS IQYSDFNSPK ERSWMLRYDL NFTSYGIPGL TFMTRYARGS GADYSNANQF YMRTDDNGNP LDNQKRWERD VEVKYVVQTG PAKDLSFRLR QATTRATAFE SDLDETRVII EYPLSIL
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