Gene PputW619_0063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0063 
Symbol 
ID6109233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp69085 
End bp70428 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content56% 
IMG OID641619819 
Productouter membrane porin 
Protein accessionYP_001746938 
Protein GI170719250 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000166078 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATCA AAGTACCACT GTATTTGGCG GCAGTTTCTG CGCTGTCTGG AAGCTATGCT 
ATTTCGGCAC AGGCAGAAGA CAAGCCAGAA GGCTTCATTG AAGGCAGCAG CCTTACAGTG
CTGAACCGTA ACTTCTACTT CAACCGTGAT AACCGCGACA GCACTGCCCC CACTTATAAC
AGTGGCAAGG GCAACACCAA CGGCTACTCC GAAGCCTGGG CGCACGCGAT CATCAGCAAA
TTCAACTCTG GGTTTACCCA GGGAACCGTT GGCTTTGGCG TTGATGCCTT CGCCATGATC
GGCCTCAAGC TCGACACCGG TGATGGGCGC AACGGCGGCC GTAGCTCCTT CGACGTGCTA
CCCGTTGATA ACAAGGGCGA AGCTCGCGAC GAATACACCA AGGTCGGCGG CGCAGCCAAA
GTCCGCTTGT TCGATACCAT CGTGAAAGTA GGTGATGTTT TCCCATCGAC TCCGGTCGTT
GCATCCGGCG ACTCTCGCCT GCTGCCAGAA AGCTTCCGCG GCGTGACCGT TGAGAACACC
AGCATCCAAG GCCTCACCCT GCAGGGTGGT CGTCTGCATG CGATGAGCCA GCCGGTCTCA
AGCAACCTGA ACGACAACTT CGTGACGTTC TACGGCGGCC CGGTCAACTC GCCATGGATC
GGTTACGGTG GCGGTGACTA CTCGATCAAC GACAACTGGA CTGTGAGCGT CTACGCCAGC
CAGCTGAAAG ACGTCTGGAA TCAGTACTAC GCCGGCACCA GCGTGGTTTA CCCGCTGAGC
GACGATCTGG CGCTGATCGG TGGCTTCAAC TACTACAAAG CCGTAGATGA AGGTAAGAAG
CGCCTGGGTG AATTCGACAA CAACATCTGG AGTGCCAAGG TCGGCGTGCG TTACGGTGCC
CATACCCTAG CCCTGTCGCA CCAGCGCAAC AACGGCGACG ACGATTTTGA CTACCTGCGT
CAGTCGGACT CGATTTTCGT CGACAACTCC ATCCAGTACA GCGACTTCAA CTCGCCGAAA
GAGCGTTCCT GGATGCTGCG CTATGACCTG AACTTCACCA GCTACGGCAT TCCAGGCCTG
ACGTTCATGA CCCGCTACGC CAGAGGCTCG GGCGCGGATT ACTCGAACGC TAACCAGTTC
TACATGCGCA CTGATGACAA CGGCAACCCG CTCGACAATC AGAAGCGTTG GGAGCGTGAC
GTCGAAGTCA AATACGTTGT CCAAACCGGT CCAGCAAAAG ATCTGTCCTT CCGGTTGCGC
CAGGCAACCA CACGTGCCAC TGCATTCGAA TCGGATCTGG ATGAAACCCG TGTGATCATT
GAGTACCCGC TTTCGATTCT GTAA
 
Protein sequence
MKIKVPLYLA AVSALSGSYA ISAQAEDKPE GFIEGSSLTV LNRNFYFNRD NRDSTAPTYN 
SGKGNTNGYS EAWAHAIISK FNSGFTQGTV GFGVDAFAMI GLKLDTGDGR NGGRSSFDVL
PVDNKGEARD EYTKVGGAAK VRLFDTIVKV GDVFPSTPVV ASGDSRLLPE SFRGVTVENT
SIQGLTLQGG RLHAMSQPVS SNLNDNFVTF YGGPVNSPWI GYGGGDYSIN DNWTVSVYAS
QLKDVWNQYY AGTSVVYPLS DDLALIGGFN YYKAVDEGKK RLGEFDNNIW SAKVGVRYGA
HTLALSHQRN NGDDDFDYLR QSDSIFVDNS IQYSDFNSPK ERSWMLRYDL NFTSYGIPGL
TFMTRYARGS GADYSNANQF YMRTDDNGNP LDNQKRWERD VEVKYVVQTG PAKDLSFRLR
QATTRATAFE SDLDETRVII EYPLSIL