Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4964 |
Symbol | |
ID | 5872779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5537861 |
End bp | 5538505 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641550102 |
Product | hypothetical protein |
Protein accession | YP_001671184 |
Protein GI | 167035953 |
COG category | [S] Function unknown |
COG ID | [COG3009] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.340246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.72478 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCAGC CGGTTGCCCT GTACCAGCTC GACAGTGGTG ATCCTGGCCA GCCTTCGCAG AGTGCGGGCA TGGCCGTGGT GCTCGGCCCG GTATCGGTGG CCGATTACCT GCAGCGTGAA ACCTTTCTGC AGCGTCAAGC CGATGGCAGC CTGAGTGCGG CGACCGACGG CCGTTGGGCT GGCAGCCTTT CGTCGGATAT CGACCAACTG CTGGTGCGCC AACTGGCCTG GCGTCTGGAC AGCCAACGCG TTGTGCTGGC ACCGGCGACC ACGGGCTTCA GCCCGGACGT GCAGGTGTTG TTGTCGATCA CTCGCCTGGA CTCGGGCAAG GATCAGCCGG CCATACTGGA TGCCCAGTGG CGTCTGCTCG ACCGCCGTGG CCATGTGCGT GACAACCGTA TCGTTCACCT CGAACAGCCG CACGAGGGCA GCGAATCGTC GCAGGTTCAG GCTCAGGGCC AACTGCTGCA GAAGCTGGCC GAACAGCTGA GCACAGCGCT GAAGCCGCTG GCCAACCAGC CGGCGATTGC CGAAGAGTCG CCTAAAAAGC CCGCTGCGCC GGTACAGGTG AAGAAGGCAC CGGAGAAATC CAAGATCCCG ATGGCCTCCC CGATTCGTAC CGATATGGAA GTTTATCGGT TCTGA
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Protein sequence | MHQPVALYQL DSGDPGQPSQ SAGMAVVLGP VSVADYLQRE TFLQRQADGS LSAATDGRWA GSLSSDIDQL LVRQLAWRLD SQRVVLAPAT TGFSPDVQVL LSITRLDSGK DQPAILDAQW RLLDRRGHVR DNRIVHLEQP HEGSESSQVQ AQGQLLQKLA EQLSTALKPL ANQPAIAEES PKKPAAPVQV KKAPEKSKIP MASPIRTDME VYRF
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