Gene PputGB1_4964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4964 
Symbol 
ID5872779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5537861 
End bp5538505 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content63% 
IMG OID641550102 
Producthypothetical protein 
Protein accessionYP_001671184 
Protein GI167035953 
COG category[S] Function unknown 
COG ID[COG3009] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.340246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.72478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCAGC CGGTTGCCCT GTACCAGCTC GACAGTGGTG ATCCTGGCCA GCCTTCGCAG 
AGTGCGGGCA TGGCCGTGGT GCTCGGCCCG GTATCGGTGG CCGATTACCT GCAGCGTGAA
ACCTTTCTGC AGCGTCAAGC CGATGGCAGC CTGAGTGCGG CGACCGACGG CCGTTGGGCT
GGCAGCCTTT CGTCGGATAT CGACCAACTG CTGGTGCGCC AACTGGCCTG GCGTCTGGAC
AGCCAACGCG TTGTGCTGGC ACCGGCGACC ACGGGCTTCA GCCCGGACGT GCAGGTGTTG
TTGTCGATCA CTCGCCTGGA CTCGGGCAAG GATCAGCCGG CCATACTGGA TGCCCAGTGG
CGTCTGCTCG ACCGCCGTGG CCATGTGCGT GACAACCGTA TCGTTCACCT CGAACAGCCG
CACGAGGGCA GCGAATCGTC GCAGGTTCAG GCTCAGGGCC AACTGCTGCA GAAGCTGGCC
GAACAGCTGA GCACAGCGCT GAAGCCGCTG GCCAACCAGC CGGCGATTGC CGAAGAGTCG
CCTAAAAAGC CCGCTGCGCC GGTACAGGTG AAGAAGGCAC CGGAGAAATC CAAGATCCCG
ATGGCCTCCC CGATTCGTAC CGATATGGAA GTTTATCGGT TCTGA
 
Protein sequence
MHQPVALYQL DSGDPGQPSQ SAGMAVVLGP VSVADYLQRE TFLQRQADGS LSAATDGRWA 
GSLSSDIDQL LVRQLAWRLD SQRVVLAPAT TGFSPDVQVL LSITRLDSGK DQPAILDAQW
RLLDRRGHVR DNRIVHLEQP HEGSESSQVQ AQGQLLQKLA EQLSTALKPL ANQPAIAEES
PKKPAAPVQV KKAPEKSKIP MASPIRTDME VYRF