Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4497 |
Symbol | |
ID | 5872304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5030683 |
End bp | 5031168 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641549630 |
Product | putative nucleotide-binding protein |
Protein accession | YP_001670719 |
Protein GI | 167035488 |
COG category | [S] Function unknown |
COG ID | [COG1666] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.253922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.709145 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCGT TCGACGTGGT ATCGGAACTG GACAAGCACG AAGTGCAGAA CGCCGTTGAT AACGCCATCA AGGAGCTTGA TCGCCGTTAC GACCTGAAGG GCAAGGGCTC CTTCGAGTTC AAGGACAAAG ATCAGACCGT GATGCTGACC GCCGAGGAAG AGTTCCAGCT CGAAGCGATG CTGGAAATCC TGCGCCTGGC ACTGGTCAAA CGCAAGATCG ACGTGAAATG CCTGGAAACC AAGGATCCGT ACCCTTCCGG CAAGGAAAAG AAACAGGAAG CCAAGTTCCG CGAGGGCATC GACAAGGACC TGGCGAAAAA GATCGTTGCC ACCATCAAGG ACGGCAAGCT GAAAGTACAG GCCGCCATTC AGGGCGAGCA GGTGCGCGTA ACTGGCAAGA AGCGCGACGA CCTGCAGGAA GCCATTGCCC TGCTGCGCAC CAAGGAATTC GACATGCCTC TGCAGTTCAA CAACTTCCGC GACTGA
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Protein sequence | MPSFDVVSEL DKHEVQNAVD NAIKELDRRY DLKGKGSFEF KDKDQTVMLT AEEEFQLEAM LEILRLALVK RKIDVKCLET KDPYPSGKEK KQEAKFREGI DKDLAKKIVA TIKDGKLKVQ AAIQGEQVRV TGKKRDDLQE AIALLRTKEF DMPLQFNNFR D
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